EST details — SGN-E358785
Search information |
Request: 358785 | Match: SGN-E358785 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C102370 | Clone name: cLHT-24-K16 |
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Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C194046 [TUS-69-M20] | Trace: SGN-T347311 | EST: SGN-E546436 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C194046 [TUS-69-M20] | Trace: SGN-T350246 | EST: SGN-E549371 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E358785 | Length: 240 bp (880 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E358785 [] (trimmed)
GATTACTCTCCCGCCCAACTCCTTCCCTACTCCGCCGCCGCACCACCGGCACTACCGCCGCACCACCGCCAAGCCCAAACGAAAGCCCACTCATT
CTCCGTCTCATTTCACTTCATCCATCACTACTCCTCAATCTCCGCTCCTATCCTCATTTCGATGGGATTCCGCTTCCGCTTCAGCTGTAATAGTC
TTAAATACTATGCTGAGTTGGCGTCTAAGCTAGCGCAGGATGGGAGGTTC
CTCCGTCTCATTTCACTTCATCCATCACTACTCCTCAATCTCCGCTCCTATCCTCATTTCGATGGGATTCCGCTTCCGCTTCAGCTGTAATAGTC
TTAAATACTATGCTGAGTTGGCGTCTAAGCTAGCGCAGGATGGGAGGTTC
Unigenes |
Current Unigene builds | |||||
[SGN-E358785] | SGN-U597344 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T170345 [Download] [View] | Facility Assigned ID: THTDP68TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.947 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |