EST details — SGN-E359894
| Search information |
| Request: 359894 | Match: SGN-E359894 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C108493 | Clone name: cLPP-9-D12 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194499 [TUS-70-P17] | Trace: SGN-T348089 | EST: SGN-E547214 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C194499 [TUS-70-P17] | Trace: SGN-T348090 | EST: SGN-E547215 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E359894 | Length: 494 bp (920 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E359894 [] (trimmed)
TCTCAAGTCAAATCCTCCATTGAAGAAACTTTAAGCTCCAAGGAAGAGGATCAAATTCCCCATGTTTTAACCTAAATTTCGTGGATAGGTCTTCA
ATGAGGTGGTGGCAACTGAGGATTCCTAGAGTTGAAGCTTGGGAAGTAGATTTCTCTCAAGATTGGATATGAGTCGAAGGAGGACACCTGCATGA
AGTGTGAAGAAAGGAGTAGTGAATGAGGGATTTCCTTCCCTAGACAAATAAGTTCCTCAAGATGAAAAAATGCCTACAGCTAGTTAAGCGAATGA
GGTTCTGGTAGTTCCCCTGGAGATGACTAAAGAGGAGGTTAAAAGAGCTCTTATTGCCCTATACCGAGCCACTTAAGAATATAGTGAAGTGGGGC
CTAGGGTGAATTCTCTTGAGAGTACCATGACTTCTAGGTTGAGGTACTTTGTTCAAAGGTGGGATAGGATCCCCAAGAGTTTCTAGATTGTGTTT
ATAAAGTGTTGAATGCTAT
ATGAGGTGGTGGCAACTGAGGATTCCTAGAGTTGAAGCTTGGGAAGTAGATTTCTCTCAAGATTGGATATGAGTCGAAGGAGGACACCTGCATGA
AGTGTGAAGAAAGGAGTAGTGAATGAGGGATTTCCTTCCCTAGACAAATAAGTTCCTCAAGATGAAAAAATGCCTACAGCTAGTTAAGCGAATGA
GGTTCTGGTAGTTCCCCTGGAGATGACTAAAGAGGAGGTTAAAAGAGCTCTTATTGCCCTATACCGAGCCACTTAAGAATATAGTGAAGTGGGGC
CTAGGGTGAATTCTCTTGAGAGTACCATGACTTCTAGGTTGAGGTACTTTGTTCAAAGGTGGGATAGGATCCCCAAGAGTTTCTAGATTGTGTTT
ATAAAGTGTTGAATGCTAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E359894] | SGN-U564862 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T172557 [Download] [View] | Facility Assigned ID: TPOBJ18TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.943 | Expected Error Rate: 0.0119 | Quality Trim Threshold: 14.5 |
Working
