EST details — SGN-E360321
Search information |
Request: 360321 | Match: SGN-E360321 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C108386 | Clone name: cLPP-8-M23 |
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Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C194488 [TUS-70-P6] | Trace: SGN-T348070 | EST: SGN-E547195 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C194488 [TUS-70-P6] | Trace: SGN-T348071 | EST: SGN-E547196 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E360321 | Length: 490 bp (895 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E360321 [] (trimmed)
TGCAGTGACTTTAATTAAACAGGGAGAACATTTGGTAGTTGGAAATTTAGGAGATTCTCGAGCTATTATTTGCACCAGGGATGACAAAAATGAGC
TTGTTGCTAAGCAACTCACGGTAGACTTGAAGCCTAACCTCCCAGCTGAATATGAAAGAATCAAAAGTTGTGAAGGAAGAGTAATGGCGATGGAG
GAAGAACCAAATATATACAGAGTATGGATGCCTGATCAAGATTGCCCTGGCCTTGCCATGGCTAGAGCTTTCGGAGATTTTTGTTTGAAAGACTT
TGGTCTCATTTCGGTACCTGAAGTATATTACAGAAAGCTCACTGAAAAGGATGAATTCATTGTCTTGGCATCAGACGGGTTGTGGGATGTTTTAA
GCAACAATGAAGTGATCCGGATAGTAGCTTCAGCAAGGAAACGATCTATTGCAGCAAGACTCGTGGTGCATCATGCAGTTCGAGCCTGGAAATAC
AAGTACCCGTGTGCC
TTGTTGCTAAGCAACTCACGGTAGACTTGAAGCCTAACCTCCCAGCTGAATATGAAAGAATCAAAAGTTGTGAAGGAAGAGTAATGGCGATGGAG
GAAGAACCAAATATATACAGAGTATGGATGCCTGATCAAGATTGCCCTGGCCTTGCCATGGCTAGAGCTTTCGGAGATTTTTGTTTGAAAGACTT
TGGTCTCATTTCGGTACCTGAAGTATATTACAGAAAGCTCACTGAAAAGGATGAATTCATTGTCTTGGCATCAGACGGGTTGTGGGATGTTTTAA
GCAACAATGAAGTGATCCGGATAGTAGCTTCAGCAAGGAAACGATCTATTGCAGCAAGACTCGTGGTGCATCATGCAGTTCGAGCCTGGAAATAC
AAGTACCCGTGTGCC
Unigenes |
Current Unigene builds | |||||
[SGN-E360321] | SGN-U566856 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T172197 [Download] [View] | Facility Assigned ID: TPOBC84TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.964 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 14.5 |