EST details — SGN-E362432
| Search information |
| Request: 362432 | Match: SGN-E362432 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C105995 | Clone name: cLPP-1-I11 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194237 [TUS-70-E19] | Trace: SGN-T347639 | EST: SGN-E546764 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C194237 [TUS-70-E19] | Trace: SGN-T347640 | EST: SGN-E546765 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E362432 | Length: 518 bp (986 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E362432 [] (trimmed)
TTTCCTTCATTCTTGCTGCTCATCAAATTAAATCAATGGAGATGAATTTAGTTTCAGGTCTCCTCTTATTCTCATTCCTTTTTATTCTTTTTCGA
AAATGGAGAAGAAGCCAACAACACAATTTGCCTCCAGGTCCATGGAGACTCCCACTCATTGGGAGTTTGCATCACTTAATTAGTGGACATAATCC
ACATCGTATTTTTAGAGATCTAGCTCGAAAATACGGCCCTGTAATGTACTTGGAACTCGGGGAAGTTCCTACCGTGATCATATCATCACCTTCTA
CGTCCAAACAAGTTTTAAAAACTCATGATCTCGCCTTTGCTAGTAGGCCACAATTTACATCCACTGATATTGTCATGTACAATAATAAAGATATT
GCATTTGCAGAATATGGTGACTACTGGAAACAAATGCGCAAAATTTGTATAATGGAACTTCTAAGTGCCAAGATGGTCAAGTCATTTAGCTCAAT
TCGAAAGGATGAACTCTCGAGTGTTCTCTCATCAATTGATTCT
AAATGGAGAAGAAGCCAACAACACAATTTGCCTCCAGGTCCATGGAGACTCCCACTCATTGGGAGTTTGCATCACTTAATTAGTGGACATAATCC
ACATCGTATTTTTAGAGATCTAGCTCGAAAATACGGCCCTGTAATGTACTTGGAACTCGGGGAAGTTCCTACCGTGATCATATCATCACCTTCTA
CGTCCAAACAAGTTTTAAAAACTCATGATCTCGCCTTTGCTAGTAGGCCACAATTTACATCCACTGATATTGTCATGTACAATAATAAAGATATT
GCATTTGCAGAATATGGTGACTACTGGAAACAAATGCGCAAAATTTGTATAATGGAACTTCTAAGTGCCAAGATGGTCAAGTCATTTAGCTCAAT
TCGAAAGGATGAACTCTCGAGTGTTCTCTCATCAATTGATTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E362432] | SGN-U599021 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T174493 [Download] [View] | Facility Assigned ID: TPOAA54TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0121 | Quality Trim Threshold: 14.5 |
Working
