EST details — SGN-E362532
Search information |
Request: 362532 | Match: SGN-E362532 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C106050 | Clone name: cLPP-1-K23 |
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Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C194249 [TUS-70-F7] | Trace: SGN-T347660 | EST: SGN-E546785 | Direction: 5' | Facility: INRA (MWG) |
Clone: SGN-C194249 [TUS-70-F7] | Trace: SGN-T350303 | EST: SGN-E549428 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E362532 | Length: 405 bp (1030 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E362532 [] (trimmed)
TTGGAGATAGAGAAACAGGTTCATAACTGGTGGACAGAAGGTGATGTTTTCAAAGCTGAACCTAAAGAATCACCTCCTAAAGTGGGGGAAAAGTT
CTTTGGGAATTTCCCTTTTCCTTATATGAATGGATATCTACATTTGGGTCATGCTTTTTCAGTGTCAAAACTAGAATTTGCAGCAGCATATCACA
GATTGAAAGGTGCTACTGTTCTTTTGCCTTTTGCCTTTCACTGCACTGGGATGCCCATAAAGGCATCTTCGGATAAGCTTTCAAGGGAGATATCG
ATGTTTGGGAACCCACCTGTTTTTCCGGCTAGGGAAGAAGAGAATGTTGAACCAGAAGTGAAGGTTGAGACTGAAGGAAATCAGCCTGCACCGGG
TGGAAAATTTAAAGGAAAAAAATCA
CTTTGGGAATTTCCCTTTTCCTTATATGAATGGATATCTACATTTGGGTCATGCTTTTTCAGTGTCAAAACTAGAATTTGCAGCAGCATATCACA
GATTGAAAGGTGCTACTGTTCTTTTGCCTTTTGCCTTTCACTGCACTGGGATGCCCATAAAGGCATCTTCGGATAAGCTTTCAAGGGAGATATCG
ATGTTTGGGAACCCACCTGTTTTTCCGGCTAGGGAAGAAGAGAATGTTGAACCAGAAGTGAAGGTTGAGACTGAAGGAAATCAGCCTGCACCGGG
TGGAAAATTTAAAGGAAAAAAATCA
Unigenes |
Current Unigene builds | |||||
[SGN-E362532] | SGN-U583251 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T174593 [Download] [View] | Facility Assigned ID: TPOAA72TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.954 | Expected Error Rate: 0.0040 | Quality Trim Threshold: 14.5 |