EST details — SGN-E364272
Search information |
Request: 364272 | Match: SGN-E364272 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C106353 | Clone name: cLPP-20-O3 |
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Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C194866 [TUS-71-O24] | Trace: SGN-T348719 | EST: SGN-E547844 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C194866 [TUS-71-O24] | Trace: SGN-T348720 | EST: SGN-E547845 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E364272 | Length: 377 bp (832 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E364272 [] (trimmed)
CATTTTCACTTTCTCTTGTTTGTTGTCATCTCAATCTCAGACAACACAAGAGAAAACAAAAGGATCAGTTGGGGAAGATATACATACTAATTATA
CCTATACATATATATTGTTTTGGGTATCAATTCTTGATCCATTTTTTGCACAAATTTCTGTCCCTGTTTAATAATTTTGAGTGAAAATGTCAAAA
GAAATTGAAATGGGTGTTGATCACACCGAACCCGAACCCGAACCCGAAGAATCTTCTCCTCTGATCCCTCCTACTGTAATTACTGTACCTAATAT
TAATGATGATGATGATATTATAGACCTTGAAGCAGGTCCTGATGAACATATTCAATGCCGTATTTGCCTCGAATCTGACGGTAGGGACTTTA
CCTATACATATATATTGTTTTGGGTATCAATTCTTGATCCATTTTTTGCACAAATTTCTGTCCCTGTTTAATAATTTTGAGTGAAAATGTCAAAA
GAAATTGAAATGGGTGTTGATCACACCGAACCCGAACCCGAACCCGAAGAATCTTCTCCTCTGATCCCTCCTACTGTAATTACTGTACCTAATAT
TAATGATGATGATGATATTATAGACCTTGAAGCAGGTCCTGATGAACATATTCAATGCCGTATTTGCCTCGAATCTGACGGTAGGGACTTTA
Unigenes |
Current Unigene builds | |||||
[SGN-E364272] | SGN-U586590 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T177400 [Download] [View] | Facility Assigned ID: TPOCY86TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.953 | Expected Error Rate: 0.0130 | Quality Trim Threshold: 14.5 |