EST details — SGN-E365149
Search information |
Request: 365149 | Match: SGN-E365149 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C105111 | Clone name: cLPP-17-B23 |
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Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C194762 [TUS-71-K16] | Trace: SGN-T348541 | EST: SGN-E547666 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E365149 | Length: 419 bp (897 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E365149 [] (trimmed)
TTAATAGTCGCAATGCAAAACTTTGGTAGTCGTCTCATTGATTGATCTACCAGCCCCCAGCAGCAGGAGGAGGAAATTGTGATGATGAAAACTAC
AAGTCATTGTGTTCCATATGTCTATCTGAATATGTAAAGGACAACACAATTGGTACACTCGGTTGTGGACATGAATATCACGCAACTTGCATACA
ACAATGGCTGCTGAGGGGCAAGAAGAATTGTCCAATCTGTAGATCTTCTGTTTAACAGAAACTTTACTTTTCTTTTTATCAAGTTGTTGTTATTT
GAACTTTTTAATATGAACAATTTTTTATTCAGTTTGCTATTTTTTATATGTATTGTTGGTGATTGAATTCACCTTCTAGAACAATTCTGCAACTC
AATTTATGGAATTATTCTTTACAAAAAAAAAAAAAAAAA
AAGTCATTGTGTTCCATATGTCTATCTGAATATGTAAAGGACAACACAATTGGTACACTCGGTTGTGGACATGAATATCACGCAACTTGCATACA
ACAATGGCTGCTGAGGGGCAAGAAGAATTGTCCAATCTGTAGATCTTCTGTTTAACAGAAACTTTACTTTTCTTTTTATCAAGTTGTTGTTATTT
GAACTTTTTAATATGAACAATTTTTTATTCAGTTTGCTATTTTTTATATGTATTGTTGGTGATTGAATTCACCTTCTAGAACAATTCTGCAACTC
AATTTATGGAATTATTCTTTACAAAAAAAAAAAAAAAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E365149] | SGN-U598811 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T176861 [Download] [View] | Facility Assigned ID: TPOCO12TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.944 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |