EST details — SGN-E366334
Search information |
Request: 366334 | Match: SGN-E366334 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C109854 | Clone name: cLPT-1-E23 |
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Library Name: cLPT | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C109854 [cLPT-1-E23] | Trace: SGN-T177758 | EST: SGN-E366333 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E366334 | Length: 572 bp (937 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E366334 [] (trimmed)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGACATGAGACTTTATCATCAATATTATATGTATATACTATTAATACAGATACATTGT
CAAGAGGCATTTGCCTATTAACCAATGCAGAAATTAAAACTGAACACTGACTATTACACTGTTTTGATACACAATTACATTAGACAGAATGAAGT
AGAATAAGACGGAATTACATACCAATGAATACTAACAACATCGAGGCCACAAATCATCTGGTTTCATCGATCCTAAATTCTGAAAGAACCTTGCT
TTCAGTGACACTGACACAGCTTGTGCTTACATTTATAGAAGGTAAGCGATTTATACCAGGCAATGCCATTTGCCACGAAACATCGGATTTGGTAT
CCTCATGAGATTGTTGGGCCATTGTAGGGTGTTGAAGCTGTCGAGCGTAATTCAAGTCCCACAACACATTCATCATATTAGGCCTATCAGTGCCA
TTCTCTTGCAGACACTTCTCTGCTGTTTCTCCGAATTTCCTTAGGGAGTTTGGGTTAATTTTACCAACAAGAAATGGATCGATTATCTTTTCGAT
CT
CAAGAGGCATTTGCCTATTAACCAATGCAGAAATTAAAACTGAACACTGACTATTACACTGTTTTGATACACAATTACATTAGACAGAATGAAGT
AGAATAAGACGGAATTACATACCAATGAATACTAACAACATCGAGGCCACAAATCATCTGGTTTCATCGATCCTAAATTCTGAAAGAACCTTGCT
TTCAGTGACACTGACACAGCTTGTGCTTACATTTATAGAAGGTAAGCGATTTATACCAGGCAATGCCATTTGCCACGAAACATCGGATTTGGTAT
CCTCATGAGATTGTTGGGCCATTGTAGGGTGTTGAAGCTGTCGAGCGTAATTCAAGTCCCACAACACATTCATCATATTAGGCCTATCAGTGCCA
TTCTCTTGCAGACACTTCTCTGCTGTTTCTCCGAATTTCCTTAGGGAGTTTGGGTTAATTTTACCAACAAGAAATGGATCGATTATCTTTTCGAT
CT
Unigenes |
Current Unigene builds | |||||
[SGN-E366334] | SGN-U603322 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T177759 [Download] [View] | Facility Assigned ID: TPTAA36TV |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.950 | Expected Error Rate: 0.0138 | Quality Trim Threshold: 14.5 |