EST details — SGN-E367581
| Search information |
| Request: 367581 | Match: SGN-E367581 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C111124 | Clone name: cLPT-7-J4 |
| ||
| Library Name: cLPT | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: Alias clone SGN-C185240 is on microarray TOM1: SGN-S1-1-3.2.11.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185240 [TUS-46-N22] | Trace: SGN-T192283 | EST: SGN-E390957 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185240 [TUS-46-N22] | Trace: SGN-T197619 | EST: SGN-E396293 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E367581 | Length: 528 bp (841 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E367581 [] (trimmed)
ACAAATAATTGCTCTTACAATATTCTTATCAATGGGATCCTCTAAGCCTATCATAACTATTTTCATCTTATTATTTTCACTCTTTGTTCTTTTCC
CTAATCCTTCTTTAGCCAATTCAAGAATACTTGCTCTAGTTAAAGAAAAACCTCTTGTCCTAAAATACCATAAAGGGGCTCTATTAAAAGGAAAC
GTTACGATTAATCTTATATGGTACGGAAAATTCACTTCCGTACAACGTTCGATTATCGTCGATTTCATCCGATCTCTTAGCCCTAAGACCAAGAA
AATTAAGTCACCACCTTCCGTTGCTTCGTGGTGGAGCACCACCGAAGCGTACAAAGGTGGTGCGTCGGTTATTTCCCTAGGAAAACAAATTTTCG
ATGAAAAATATTCTCTAAGAAAATATTTGAAAGACCATCAACTCGAATCTTTGGCTTCTAAGGCTACTCGGGTCAACTCCATTGCTGTCATATTG
ACGGCGACAGATGTGGGGGTCGACGACTTTTGCATGAACCGATGTGGCATGCA
CTAATCCTTCTTTAGCCAATTCAAGAATACTTGCTCTAGTTAAAGAAAAACCTCTTGTCCTAAAATACCATAAAGGGGCTCTATTAAAAGGAAAC
GTTACGATTAATCTTATATGGTACGGAAAATTCACTTCCGTACAACGTTCGATTATCGTCGATTTCATCCGATCTCTTAGCCCTAAGACCAAGAA
AATTAAGTCACCACCTTCCGTTGCTTCGTGGTGGAGCACCACCGAAGCGTACAAAGGTGGTGCGTCGGTTATTTCCCTAGGAAAACAAATTTTCG
ATGAAAAATATTCTCTAAGAAAATATTTGAAAGACCATCAACTCGAATCTTTGGCTTCTAAGGCTACTCGGGTCAACTCCATTGCTGTCATATTG
ACGGCGACAGATGTGGGGGTCGACGACTTTTGCATGAACCGATGTGGCATGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E367581] | SGN-U564308 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T179143 [Download] [View] | Facility Assigned ID: TPTBB50TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0105 | Quality Trim Threshold: 14.5 |
Working
