EST details — SGN-E367824
Search information |
Request: 367824 | Match: SGN-E367824 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C175747 | Clone name: TUS-22-C9 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175747 is on microarray TOM1 spot ID 1-1-8.3.11.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C16690 [cLED-17-E23] | Trace: SGN-T52918 | EST: SGN-E238476 | Direction: 5' | Facility: TIGR |
Clone: SGN-C175747 [TUS-22-C9] | Trace: SGN-T180437 | EST: SGN-E367823 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E367824 | Length: 712 bp (943 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E367824 [] (trimmed)
ACACCACCCACTTCAGCTAAACTCAACTTAGAAGCAATATTGGTCTCTATTGATGATTTTTTCACAAAGTATCCATTCTTTGTTGCTGGGGTTAC
CTTTATTTGGCTTGTTCTTATACCGTTAGCAGAAGAGTACTTGCAAAAGTTTAACTTTATCTCAGCCGTTGATGCATTTGCAAAGCTTCGTGATG
ACCCCAATACCCAGCTTTTAGATATTCGGGATAACAAGAGCTTAGCTTATTTGCCTTCTCCCACTTTGAGAATGTTAAATAAGAGTGTGATACAG
GTTGAGTTCCGCCAAGGAGATGAAGATGCCTTTCTCAACTGTGTCTTTCAGAAATTCAACGACCCACAATATACTACGCTTTGTGTTATAGACAA
TTTTGATGGGAACTCCATTAAAGTGGCTGAATTATTGGTCAAAAATGGTCTCAAAGAGGCTTATGCTATCCGAGGTGGGATAAGAGGCAAGAAAG
GATGGCAGGAGATCCAAGAAACCCTTCTCCCTCCATCTGTTCATATTTATCCCAAGAAGAAGGATAAAGGGTTGCAACCGCAAAGCAGCAATAAT
GGGGTGATTCAAGCAAATGAAATTAATAGTCAATCTCCATCCGCTATAGGTGTGACCCAAGTTGAGCAGATAAGCAATGGTCCTGTTAAGAAGTC
TGCTGACTCACCCTCAGCAATAAAATGTGGTCCTAGGTCATCATCGC
CTTTATTTGGCTTGTTCTTATACCGTTAGCAGAAGAGTACTTGCAAAAGTTTAACTTTATCTCAGCCGTTGATGCATTTGCAAAGCTTCGTGATG
ACCCCAATACCCAGCTTTTAGATATTCGGGATAACAAGAGCTTAGCTTATTTGCCTTCTCCCACTTTGAGAATGTTAAATAAGAGTGTGATACAG
GTTGAGTTCCGCCAAGGAGATGAAGATGCCTTTCTCAACTGTGTCTTTCAGAAATTCAACGACCCACAATATACTACGCTTTGTGTTATAGACAA
TTTTGATGGGAACTCCATTAAAGTGGCTGAATTATTGGTCAAAAATGGTCTCAAAGAGGCTTATGCTATCCGAGGTGGGATAAGAGGCAAGAAAG
GATGGCAGGAGATCCAAGAAACCCTTCTCCCTCCATCTGTTCATATTTATCCCAAGAAGAAGGATAAAGGGTTGCAACCGCAAAGCAGCAATAAT
GGGGTGATTCAAGCAAATGAAATTAATAGTCAATCTCCATCCGCTATAGGTGTGACCCAAGTTGAGCAGATAAGCAATGGTCCTGTTAAGAAGTC
TGCTGACTCACCCTCAGCAATAAAATGTGGTCCTAGGTCATCATCGC
Unigenes |
Current Unigene builds | |||||
[SGN-E367824] | SGN-U572583 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T180438 [Download][View] | Facility Assigned ID: FA0AAD10AB05RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.974 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 14.5 |