EST details — SGN-E367840
Search information |
Request: 367840 | Match: SGN-E367840 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C175935 | Clone name: TUS-22-K5 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175935 is on microarray TOM1 spot ID 1-1-4.3.11.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C17420 [cLED-19-J8] | Trace: SGN-T53657 | EST: SGN-E237743 | Direction: 5' | Facility: TIGR |
Clone: SGN-C175935 [TUS-22-K5] | Trace: SGN-T180455 | EST: SGN-E367841 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E367840 | Length: 633 bp (935 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E367840 [] (trimmed)
AGTACTTAGATACTTTATTATTATTAAAAGATACATAACAATAACAACTAAGAGAAATAACATACAAAATAAATAGATGATCAAGTGCACATAAC
TAATTGTATTTGCTTTACACTTTCAATCCAAATTTCCAACTTTTCCAATCCTCAAGTAAATAGGATAAATCACTTTTTTCTCACTCTTCCCATCT
TCATTCCAAGCACTTGTAAATTTTTCAACAACATCTTCACTTAACAACTCAACACCCTTTTCTTTTGCAGTTTGATAAGCTGACCATGACTTCAA
GTATGTAAAACAAGAATCCAAGTCCATAACTTTCTCAATCTTGAACTCAAATGGTCCATTATGATCACATCCATCTATAGCCTCAAATGGAAAAT
CAATAGTTTCATACTTTTCATCGACCAATTTTCTTGGTGATTCCCAATAAGGTCCAGCATCACTTGTGTAAAATTTATCAAATATTGCATCTACT
GAGTTGTTTATTTTAGGTGTAGTGTAACACCATGATGCTATAACACCATTTGGTTTCTTGAGTAACCATTTAACATGTTCATAAAAAGTTGGTAG
ATCAAACCAATGCATTGCTTTGTGCAATTGTTACTAAAATCTACACTTGATTCTGATCCTATT
TAATTGTATTTGCTTTACACTTTCAATCCAAATTTCCAACTTTTCCAATCCTCAAGTAAATAGGATAAATCACTTTTTTCTCACTCTTCCCATCT
TCATTCCAAGCACTTGTAAATTTTTCAACAACATCTTCACTTAACAACTCAACACCCTTTTCTTTTGCAGTTTGATAAGCTGACCATGACTTCAA
GTATGTAAAACAAGAATCCAAGTCCATAACTTTCTCAATCTTGAACTCAAATGGTCCATTATGATCACATCCATCTATAGCCTCAAATGGAAAAT
CAATAGTTTCATACTTTTCATCGACCAATTTTCTTGGTGATTCCCAATAAGGTCCAGCATCACTTGTGTAAAATTTATCAAATATTGCATCTACT
GAGTTGTTTATTTTAGGTGTAGTGTAACACCATGATGCTATAACACCATTTGGTTTCTTGAGTAACCATTTAACATGTTCATAAAAAGTTGGTAG
ATCAAACCAATGCATTGCTTTGTGCAATTGTTACTAAAATCTACACTTGATTCTGATCCTATT
Unigenes |
Current Unigene builds | |||||
[SGN-E367840] | SGN-U580752 | Tomato 200607 | Build 2 | 98 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T180454 [Download][View] | Facility Assigned ID: FA0AAD10AF03FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.911 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 14.5 |