EST details — SGN-E367848

Search information 
Request: 367848Match: SGN-E367848
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175981Clone name: TUS-22-M3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175981 is on microarray TOM1 spot ID 1-1-6.1.11.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18614 [cLED-24-B10] Trace: SGN-T54734 EST: SGN-E240837 Direction: 5' Facility: TIGR
Clone: SGN-C175981 [TUS-22-M3] Trace: SGN-T180463 EST: SGN-E367849 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E367848Length: 722 bp (904 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E367848 [] (trimmed) AGAGGAGATAATTTTCTTATTCAAGTATGTATTACAAAAGGTGAATGATATCTCTATTTATAGAGTTGAGATATCACCCCAAAAGCCCCCATGAT
AAATGTCCAATTAGTAGGTACATAGTTATCCAAATGATTCTTATCACCTTGGGAACATGTATACATGAATACAATTAAGTCTTGAGTAAATCTAA
AGGACAATCCACACAATTCAATGGATTTATAACAATAAAATAAAATTAAAGGATATTCAGACTTTTTTTCTTTAAAAAGTAAAATAAAAAATAGA
ATCCGAGATTATCAAATTAAAAAGCAGCACATGGTTTCCCCAATTCCCAGCATGACCCACAGATATGTCTATCCAAATTCTTTAAATCTAAAAGC
ACACAGATACTTGTATTCGTAAATCCATCATAACGGCCGCACATGGAAATTAAATATGTGGGCGCATACGAGACTCATCGTATGAGTGATGAGTT
GCATTTCACGCAATCTCATTTTGGCTGCCAGGAAGCTTCTTGATAATATTCAGGTGTTTGATTTGGTACTTGGGTCATCAGTCTCGACCTACTCA
TGGATATACGCTGGATTGGCCTAGTTATCATGGACTACATGGCTCACATTCTTGATTACTTTTCTGTCGAGCAGCATCAAATTTTCTCCAATATC
CATAGTATAACTTCAGGAAACAATATGAAACTTATCGTATGAGTGATGTGTTGCCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367848] SGN-U589673 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180462 [Download][View] Facility Assigned ID: FA0AAD10AG02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0021 Quality Trim Threshold: 14.5