EST details — SGN-E367928

Search information 
Request: 367928Match: SGN-E367928
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175763Clone name: TUS-22-D1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175763 is on microarray TOM1 spot ID 1-1-8.4.11.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C16733 [cLED-17-G6] Trace: SGN-T52792 EST: SGN-E238350 Direction: 5' Facility: TIGR
Clone: SGN-C175763 [TUS-22-D1] Trace: SGN-T180678 EST: SGN-E367929 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E367928Length: 639 bp (913 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E367928 [] (trimmed) AAATTTGATATATAGAGTAAAAAATCATATAAATACACAGCGGCTATAAGCTTTTTAATACAGTTTAAATATGTTCCATCCCAACATAAAAATAT
GTTTAACTAACCCTATTATGATAAATCACCAAATAGAACCAATTAAGACATCTTGTGGCTGTAGTTTAGTGGTAAGAATTCCACGTTGTGGCCGT
GGAGACCTGGGCTCGAATCCCAGCAGCCACATTCTACCATTATTTTGTGAACTTTATCATTTTCAATCCACGTATATCTACCTCAAACTAACAAG
TATGTAAATCCTCTACGAAAATACTACTCTATTATATGATGTATGCCACAATGTCTTAACTAAAAATGAACTAAAGAAGAAAGCTACTGCTTGTG
AGAGTGCAGATTTTTGTGATTCTGCATAGGAAGCACAAATCTTATTATTATCTAAGTCGAACGCAAAAGAGGCCATCTTTCTGGATAATCCATAG
CCACAATCACAGCAATGAATACCCACACCATAAGTATACCGATGAATATGGTCTTTATCAGTTCTTCTCTGTAGACACTCGTGTTGGAGACGTTG
TGATGATTAAACTCAGGGCTATCTTTCACTTGATCAGCGGCTGGTTCTGTCGGAGTGACCTCATTGGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367928] SGN-U584494 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180677 [Download][View] Facility Assigned ID: FA0AAD10CB01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0015 Quality Trim Threshold: 14.5