EST details — SGN-E367928
Search information |
Request: 367928 | Match: SGN-E367928 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C175763 | Clone name: TUS-22-D1 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175763 is on microarray TOM1 spot ID 1-1-8.4.11.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C16733 [cLED-17-G6] | Trace: SGN-T52792 | EST: SGN-E238350 | Direction: 5' | Facility: TIGR |
Clone: SGN-C175763 [TUS-22-D1] | Trace: SGN-T180678 | EST: SGN-E367929 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E367928 | Length: 639 bp (913 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E367928 [] (trimmed)
AAATTTGATATATAGAGTAAAAAATCATATAAATACACAGCGGCTATAAGCTTTTTAATACAGTTTAAATATGTTCCATCCCAACATAAAAATAT
GTTTAACTAACCCTATTATGATAAATCACCAAATAGAACCAATTAAGACATCTTGTGGCTGTAGTTTAGTGGTAAGAATTCCACGTTGTGGCCGT
GGAGACCTGGGCTCGAATCCCAGCAGCCACATTCTACCATTATTTTGTGAACTTTATCATTTTCAATCCACGTATATCTACCTCAAACTAACAAG
TATGTAAATCCTCTACGAAAATACTACTCTATTATATGATGTATGCCACAATGTCTTAACTAAAAATGAACTAAAGAAGAAAGCTACTGCTTGTG
AGAGTGCAGATTTTTGTGATTCTGCATAGGAAGCACAAATCTTATTATTATCTAAGTCGAACGCAAAAGAGGCCATCTTTCTGGATAATCCATAG
CCACAATCACAGCAATGAATACCCACACCATAAGTATACCGATGAATATGGTCTTTATCAGTTCTTCTCTGTAGACACTCGTGTTGGAGACGTTG
TGATGATTAAACTCAGGGCTATCTTTCACTTGATCAGCGGCTGGTTCTGTCGGAGTGACCTCATTGGAT
GTTTAACTAACCCTATTATGATAAATCACCAAATAGAACCAATTAAGACATCTTGTGGCTGTAGTTTAGTGGTAAGAATTCCACGTTGTGGCCGT
GGAGACCTGGGCTCGAATCCCAGCAGCCACATTCTACCATTATTTTGTGAACTTTATCATTTTCAATCCACGTATATCTACCTCAAACTAACAAG
TATGTAAATCCTCTACGAAAATACTACTCTATTATATGATGTATGCCACAATGTCTTAACTAAAAATGAACTAAAGAAGAAAGCTACTGCTTGTG
AGAGTGCAGATTTTTGTGATTCTGCATAGGAAGCACAAATCTTATTATTATCTAAGTCGAACGCAAAAGAGGCCATCTTTCTGGATAATCCATAG
CCACAATCACAGCAATGAATACCCACACCATAAGTATACCGATGAATATGGTCTTTATCAGTTCTTCTCTGTAGACACTCGTGTTGGAGACGTTG
TGATGATTAAACTCAGGGCTATCTTTCACTTGATCAGCGGCTGGTTCTGTCGGAGTGACCTCATTGGAT
Unigenes |
Current Unigene builds | |||||
[SGN-E367928] | SGN-U584494 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T180677 [Download][View] | Facility Assigned ID: FA0AAD10CB01FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.964 | Expected Error Rate: 0.0015 | Quality Trim Threshold: 14.5 |