EST details — SGN-E368290
Search information |
Request: 368290 | Match: SGN-E368290 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C177388 | Clone name: TUS-26-G18 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C177388 is on microarray TOM1 spot ID 1-1-7.3.6.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C37344 [cLEG-41-M19] | Trace: SGN-T71894 | EST: SGN-E258862 | Direction: 5' | Facility: TIGR |
Clone: SGN-C177388 [TUS-26-G18] | Trace: SGN-T182424 | EST: SGN-E368291 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E368290 | Length: 584 bp (915 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E368290 [] (trimmed)
GTAACCAAATGTAACATCATTCTCATTTTAAATGTTAAAGGCACACCTTTACAAACTATAATGACAACAACCAAAATCTTAGTAAAGGTACCAAA
ACATACTATTGAGATACCTAATAAATAGTAACTTAATCTGAATAAGATCCCCAATAGGAAAAATATGGAACTATGGAGATTGATGAGAAGTTAAT
TTTATTCTCACGTGAATGGAGCAGCAACATTTAGTCGTGTAGCTAAGAGCATAAGATAAAGTCTTGAACTTCACACTAGCATCAACATGTCTGGT
CTTAAAGAACTATAAGAAACCACTACTCAGATGGTGAATTTGATAGTACTCGGGGACCAAGGATAGCAAGAAACACCGATACTCATTCTCAGCGC
TTGGATACTACAAGATATCAAGATAGAAAAAGCTTCCTACAAGAAGATATCATGCTCTTCTCATAATATTTGTGCAGCAATAGAGACAATCGTAT
GGTGCTGTACTACTATCAAAGCCTCAACGTAATCCAAAAATCTTTTCTGGAGGATCATATATGTGCCGATCCGGAAAAATCTTTTCAAAGGCTTT
GCTTAACCCTATTT
ACATACTATTGAGATACCTAATAAATAGTAACTTAATCTGAATAAGATCCCCAATAGGAAAAATATGGAACTATGGAGATTGATGAGAAGTTAAT
TTTATTCTCACGTGAATGGAGCAGCAACATTTAGTCGTGTAGCTAAGAGCATAAGATAAAGTCTTGAACTTCACACTAGCATCAACATGTCTGGT
CTTAAAGAACTATAAGAAACCACTACTCAGATGGTGAATTTGATAGTACTCGGGGACCAAGGATAGCAAGAAACACCGATACTCATTCTCAGCGC
TTGGATACTACAAGATATCAAGATAGAAAAAGCTTCCTACAAGAAGATATCATGCTCTTCTCATAATATTTGTGCAGCAATAGAGACAATCGTAT
GGTGCTGTACTACTATCAAAGCCTCAACGTAATCCAAAAATCTTTTCTGGAGGATCATATATGTGCCGATCCGGAAAAATCTTTTCAAAGGCTTT
GCTTAACCCTATTT
Unigenes |
Current Unigene builds | |||||
[SGN-E368290] | SGN-U590765 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T182423 [Download][View] | Facility Assigned ID: FA0AAD14BD09FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.956 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |