EST details — SGN-E368407

Search information 
Request: 368407Match: SGN-E368407
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176101Clone name: TUS-23-B3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176101 is on microarray TOM1 spot ID 1-1-6.2.11.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18907 [cLED-24-P11] Trace: SGN-T54886 EST: SGN-E240989 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368407Length: 744 bp (939 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E368407 [] (trimmed) CTCCTCTCAAATCTAACAAACAAGTTGCACCAATTGTCCCATCTTTAGCTCCGCCAAAACCAGCCAAACCAAAAGCATCATCTGTCACTGAGGCT
GATGATAGTACACAATGGTCATTTAAACTTGGAAGAAAAGGACTAACTGATGAGGGAGTTCAAAAGATTGTGAAAGATCCAGCACCATATGGACC
TGGTCCATGGGGTGGAGAAGGTGGAAAACCATGGGATGATGGAGTTTTCACTGGGATCAAGCAGATAATCCTAACACAAACATCAGAGGCCATTT
CTTGTATCGAAATCGAGTATGAACGAAATGGACAGTCTGTTTGGTCAGTAAAACATGGTGCAAATGTTGGCAAATTCACAAATAAGGTAAAATTA
GAGTTTCCTCATGAAGTTTTAACATGTATTACTGGATTTTATGGTCCTATAAGTAAGGATATGGGATTGAAAGTGATAAAATCATTAACTTTCCA
CACAACTAGAAGGAAATTTGGGCCTTTTGGAGAGGAATTAGGAACATATTTCACATCATCAACAACAGAAGGAAAAGTTGTGGGATTTCATGGTA
GGTGTGGAGTGTATGTGGATGCAATTGGAGTGCATATGCAACATTGGTTAGGCAATCAAAGAACTTCCAAGAATCCTCTAATGAAAAATGTCCAC
TAAAGTTTGATACTTATTTCATGTTCTTGAATAAAGAAAAGTCAAAATTAAAAATCTATGTCGTTTCAGTCTCTTTAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368407] SGN-U581643 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181334 [Download][View] Facility Assigned ID: FA0AAD11CA02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.952 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5