EST details — SGN-E368419

Search information 
Request: 368419Match: SGN-E368419
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176159Clone name: TUS-23-D13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176159 is on microarray TOM1 spot ID 1-1-4.4.11.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C20824 [cLED-30-M22] Trace: SGN-T56458 EST: SGN-E242528 Direction: 5' Facility: TIGR
Clone: SGN-C176159 [TUS-23-D13] Trace: SGN-T181347 EST: SGN-E368420 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E368419Length: 589 bp (948 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E368419 [] (trimmed) CTGCAGAAAATTAATTTATTTTATTTATATTGCATAGAAATGAAAGAAAGAAATTATCATTCCCCTTTTTCTGGTGTCACTTGTCAACCAAAAAA
AAAAAAAAAGTTACAGCTTGTAAAAGTAACGAAGGGAACTTGTAAAAAGAACCACTTTCGCGGAGTTTCAAATTCTATAAGTGAAAGAAGTTTTA
CCTGTGAAAATTTGAACTCCATGAATCATGACACTGCCTATTTTTCGAAAAATAGAACCGAGAAGTGATCACTGAACGCTACTTCTACCTGCCAA
GTCTGCAACTATAGAACAGAGGCAGAGATCATTCTTTTAGAAGCAGCAATTGAAAAACCCAACTAATAAAAGGCAGTAGAAAGTTTTGATTAGTG
ATCATGATAAAAATTTAGAGAATCGTATAATCCGGCATCCAGTGTCAACAAGTCTCCTCAAGGTCTGTTTCATTAAGTGCCTCGGACTTGCGATT
TCCAATTTCAATATACTTATCTAAACCCCCCTCAAATTCTTTCGAGCAGAGACCTCGCACCCTAAGTAAATCTTTAAGCTCTTCTTCACCTTGAG
TATCTCCTTTTGATTGCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368419] SGN-U575720 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181346 [Download][View] Facility Assigned ID: FA0AAD11CB07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.944 Expected Error Rate: 0.0009 Quality Trim Threshold: 12.5