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EST details — SGN-E368639

Search information 
Request: 368639Match: SGN-E368639
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175812Clone name: TUS-22-F2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175812 is on microarray TOM1 spot ID 1-1-7.2.11.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C16840 [cLED-17-M1] Trace: SGN-T52937 EST: SGN-E238495 Direction: 5' Facility: TIGR
Clone: SGN-C175812 [TUS-22-F2] Trace: SGN-T180822 EST: SGN-E368640 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368639Length: 730 bp (929 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E368639 [] (trimmed) AGTTTAAAGTTGAATTGTATTGATTAATGACTTGTGTGAAATTTCGAGAGTTTATAACTGTTACGTTATAAGTTGGCAAATCACCAAGCAGAAAA
TCAACAGATAAAAAGTATCACCCTAAACTGCAACCATCAAATTATAAGAAACTTTACACTTTACCTCTAAGGTTGAGAAGGACTCTTTAATGGAA
GGAACTTCTTCCGTAAGAGAACACATGAGAAGGCAAATGGAATTGCAACCATGGACTTAAGAAAACGTTCAGCAGGACCGAGCTGAGAAATGTCT
CCAGCAAATACTCTCTTGAGTTTTAGTTCTTCATCTGTTTGTTGGTGCCATCTTCAAGAGAGTTCGTCTGAGTTCAGGAGGCAGCTCATTACCCT
CATCAAGAGCATCATAAAGTTCTGTTGTCACATTTAAGGCTTTGAGGAGAATTGCTAGATTTTGTGATTTCTTAGGATCAACAATCTGAATGTAC
TGTGAGGTTTGATCAAAGGATGAGGAAACTTTTATAAGATCATCTTTCCCTTGGTCTACTGGTATATATCCAAACAAAGAATCCATCATCTCGTC
ATTAAACCTCTAAGGTTGTGAAGGACTCTTTAATGGATGAAACTTCTTCCTGAAGAGAACACATGAGCAGCAATGCTTTCACCTGTTATGCAAAT
GGAATAGCAACCATGGACTTACAGAAACGTTTCACCAGGACCGAGCTGAGAAATGTCTTCAGGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368639] SGN-U572577 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180821 [Download][View] Facility Assigned ID: FA0AAD10DC01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0073 Quality Trim Threshold: 14.5