EST details — SGN-E368640

Search information 
Request: 368640Match: SGN-E368640
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175812Clone name: TUS-22-F2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175812 is on microarray TOM1 spot ID 1-1-7.2.11.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C16840 [cLED-17-M1] Trace: SGN-T52937 EST: SGN-E238495 Direction: 5' Facility: TIGR
Clone: SGN-C175812 [TUS-22-F2] Trace: SGN-T180821 EST: SGN-E368639 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E368640Length: 722 bp (953 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368640 [] (trimmed) CTTGCGAACCCTGACCACTCTATGGTTTGGCATGAAATTCAAGCCAGCTCGTTTCAGATACCAAGGGAAAGATAATCGAAGAAAAGCTTCCTCGT
CCTTAGACCAAACATCAAAGTGTATTCAGATTATTGATCATAAGAAATCACAAAAGCTAACAATTCTTCTCAAAGCCTTAAATGTGACAACATCA
GAAGTTTATGATGCTCTCGAAGAAGGTTATGAGCTACCTCCTGAACTCATATGAACTCTCTTGAAGATGGAACCAACAACGAATGAAGAACTAAA
ACTCAGACTATTTCCTGGAGACATTTCTCAGCTCGGTCCTGCTGAACGTTTCTGTAAGTCCATGGTTGCTATTCCATTTGCATAACAGGTGGAAG
CATTGCTGCTCATGTGTTCTCTTCAGGAAGAAGTTTCATCCATTAAAGAGTCCTTCACAACCTTAGAGGTTTAATGACGAGATGATGGATTCTTT
GTTTGGATATATACCAGTAGACCAAGGGAAAGATGATCTTATAAAAGTTTCCTCATCCTTTGATCAAACCTCACAGTACATTCAGATTGTTGATC
CTAAGAAATCACAAAATCTAGCAATTCTCCTCAAAGCCTTAAATGTGACAACAGAACTTTATGATGCTCTTGATGAGGGTAATGAGCTGCCTCCT
GAACTCAGACGAACTCTCTTGAAGATGGCACCAACAAACAGATGAAGAACTAAAACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368640] SGN-U572577 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180822 [Download][View] Facility Assigned ID: FA0AAD10DC01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0017 Quality Trim Threshold: 14.5