EST details — SGN-E368734
Search information |
Request: 368734 | Match: SGN-E368734 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C175910 | Clone name: TUS-22-J4 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175910 is on microarray TOM1 spot ID 1-1-5.2.11.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C17358 [cLED-19-G7] | Trace: SGN-T53532 | EST: SGN-E237618 | Direction: 5' | Facility: TIGR |
Clone: SGN-C175910 [TUS-22-J4] | Trace: SGN-T180915 | EST: SGN-E368733 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E368734 | Length: 604 bp (931 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E368734 [] (trimmed)
AATAAGAGGCTAAAATTAAATGTTTTTGACACTGAAACATTAATTGTCACTTCATAGATTTTTTTGGGGACGCATAATTTTTCACAAAAGAAAAC
GCTGGGTAGCTGAAGGTAAACACCATCTTGTTTCTTGCTAGGATCTGTCCTTAACGTGATTTTTTGAGAGAGAAATACAAATCATCTGGAAGCCA
CCACAAATGAATCTAACTGAAAGTTCCATAATCTTATAATAGTACTTTAAAGACGATTCAATTAGTCCCTCAAGAGTAATGAGATACAGCCCTAC
CCCACAGACATAATAAGACCCATTCCAATGAGCAATTTCAGCAGCAGCAGCATACTTGATTACCATCTGAACTTCTCTACCTGAGCTGCAAATAG
TTGTACGCATCTTTACTTCTTGTCCTCTTTCTGTTCCTTATCATTGTCCTCATCCTTCTTCTCGGACTGCCCTTGCATGGAAGCAAGCAAATCTT
TGACAGAAGGATCGTTTGGATCAACACCTGGAAGTGAGGCAAGGATTGATGACACAAATGATTGATCTGCCAACAGCTTACTCATATCTGTCGGA
TTTGACTGATCATTTGTACTGTCTTGCACAGACA
GCTGGGTAGCTGAAGGTAAACACCATCTTGTTTCTTGCTAGGATCTGTCCTTAACGTGATTTTTTGAGAGAGAAATACAAATCATCTGGAAGCCA
CCACAAATGAATCTAACTGAAAGTTCCATAATCTTATAATAGTACTTTAAAGACGATTCAATTAGTCCCTCAAGAGTAATGAGATACAGCCCTAC
CCCACAGACATAATAAGACCCATTCCAATGAGCAATTTCAGCAGCAGCAGCATACTTGATTACCATCTGAACTTCTCTACCTGAGCTGCAAATAG
TTGTACGCATCTTTACTTCTTGTCCTCTTTCTGTTCCTTATCATTGTCCTCATCCTTCTTCTCGGACTGCCCTTGCATGGAAGCAAGCAAATCTT
TGACAGAAGGATCGTTTGGATCAACACCTGGAAGTGAGGCAAGGATTGATGACACAAATGATTGATCTGCCAACAGCTTACTCATATCTGTCGGA
TTTGACTGATCATTTGTACTGTCTTGCACAGACA
Unigenes |
Current Unigene builds | |||||
[SGN-E368734] | SGN-U576036 | Tomato 200607 | Build 2 | 36 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T180916 [Download][View] | Facility Assigned ID: FA0AAD10DE02RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.958 | Expected Error Rate: 0.0055 | Quality Trim Threshold: 14.5 |