EST details — SGN-E368761
Search information |
Request: 368761 | Match: SGN-E368761 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C176052 | Clone name: TUS-22-P2 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C176052 is on microarray TOM1 spot ID 1-1-7.4.11.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C18797 [cLED-24-J5] | Trace: SGN-T54714 | EST: SGN-E240817 | Direction: 5' | Facility: TIGR |
Clone: SGN-C176052 [TUS-22-P2] | Trace: SGN-T180944 | EST: SGN-E368762 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E368761 | Length: 363 bp (916 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E368761 [] (trimmed)
GAGAACAGCGGCAAGAGGCCGTGGTAGAGGTCGTGAGAGAACGTCCTCTAGAGGAAGAGGACGAGCACCTAGTCCATCTGATGCTAGGGCGGTGA
CTCCTCCACCGACTGAGGAGCTAGTAAGAGAGGGGGAGGATGGGGAGAACAACAAGAAACAGGGTATTAAATAGTCTACATGGCATTCATAGAAA
CTATTACAGTACATAATAGATGGTACATCAATCTTAAACCTATCGGCCAAATTCTGACCCCAGAGTTCCCAAGGAGTGTCCGAGCTTGGAGGAGC
TAAAAGTATGACTAATGTTATTCATTTTCAGCTCTTGCTCACATCATATCCGCCCTCCCCTTCCTTGGAAAACCGCTC
CTCCTCCACCGACTGAGGAGCTAGTAAGAGAGGGGGAGGATGGGGAGAACAACAAGAAACAGGGTATTAAATAGTCTACATGGCATTCATAGAAA
CTATTACAGTACATAATAGATGGTACATCAATCTTAAACCTATCGGCCAAATTCTGACCCCAGAGTTCCCAAGGAGTGTCCGAGCTTGGAGGAGC
TAAAAGTATGACTAATGTTATTCATTTTCAGCTCTTGCTCACATCATATCCGCCCTCCCCTTCCTTGGAAAACCGCTC
Unigenes |
Current Unigene builds | |||||
[SGN-E368761] | SGN-U590686 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T180943 [Download][View] | Facility Assigned ID: FA0AAD10DH01FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.952 | Expected Error Rate: 0.0135 | Quality Trim Threshold: 14.5 |