EST details — SGN-E368788

Search information 
Request: 368788Match: SGN-E368788
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177325Clone name: TUS-26-E3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177325 is on microarray TOM1 spot ID 1-1-6.1.7.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C37189 [cLEG-41-F11] Trace: SGN-T72126 EST: SGN-E259094 Direction: 5' Facility: TIGR
Clone: SGN-C177325 [TUS-26-E3] Trace: SGN-T182199 EST: SGN-E368789 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E368788Length: 628 bp (929 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E368788 [] (trimmed) GTGAAAAAAATCTAATTCATTTCCAGGAACCAGACAAGATACAATAATTTTTTTGGTAAAATATATGAAACAAACTAGCATTAGCAGAATGCCTT
TTCTTAGTCCTCACAAAGAACTCAGCACAACAACAAAGGATTTTAAAAAGGAAAACAAAAAAGACAATCAAGCTCTTCCTCAATTCGAAACCAGG
TGGTGTCAACACAAGACGAAACATGAGAAATCTATAGGGGGGTCGTCCATCCTAGTACTATACTCGTCCAAGCACATTTAAAGTCATGACTAGAT
CCGATGTATAAGTGCTGGTGTGATTGCATCCCTCAAATAGGGCTATTGTTCAACGACAACATCAAACTCACGTAAGTTGTTTCATCTTAGCACCT
AATCTCATAAGAACCAGCTTTGGTGATGTAACGAACCCATTCAACTGTGTTGTAGCCACTCTTCTCCCACACCTTGAGAAACCGAACACGCAATC
CAGATGCTGTAAACATGGGAACCTGAAATTCCATTTGAATTGGCGGACGAGTCAAGGACTTTTTCTCTGTTATTGTCGAAATTTAACTCAACCTC
AGCACTCAATGTTGATTCAGTTTGCCCTGGAAAATTTTCGTATTTTCCAAACCAAACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368788] SGN-U566667 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182198 [Download][View] Facility Assigned ID: FA0AAD14AC02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5