EST details — SGN-E368834
Search information |
Request: 368834 | Match: SGN-E368834 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C177571 | Clone name: TUS-26-O9 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C177571 is on microarray TOM1 spot ID 1-1-8.3.6.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C37701 [cLEG-42-N24] | Trace: SGN-T72357 | EST: SGN-E259596 | Direction: 5' | Facility: TIGR |
Clone: SGN-C177571 [TUS-26-O9] | Trace: SGN-T182243 | EST: SGN-E368833 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E368834 | Length: 606 bp (921 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E368834 [] (trimmed)
TCAAAGTGCCGCTTATGGATACTGGAACTTTTGTTTCAACACACTTTATCACTCAACTCAGGTTATTGCTGTGCTGGTAGGAGGAATATCTATCC
TGGCTGGTCATATTACTGCAGAACAACTTACCAAATTCGTATTATACAGTGAATGGTTGATTTATTCTACATGGTGGGTAGGGGACAATTTTTCG
TCATTGATGCAATCTATTGGGGCAAGTGAGAAGGTTTTTCAATTAATGGATCTCGGTTCTAGAGATAAATTCATTGACAAAGGAGCCAAGTTGGA
AGGATTAGCAGGACGCATTGAATTTGTGAATATTAGTTTCTACTATCCTTCAAGAGTTGAGGTGCCAGTACTTCAACATATTAACTTTGTGGTGC
ATCCCGGTGAAGTAGTAGCACTCGTTGGCCTAAGTGGTAGTGGAAAAAGCACTCTGGTGAACCTTCTCCTTCGGCTGTATGAGCCAATAAGTGGG
CAGATATCTATTGATGGCTACCCGATTAGAGATTTGAACATCAAGTGGTTTGAGGGAAAGAATTGGATATGTGGGACAGGAACCTAGACTTTTTC
GCATGGATATCAGCTCAAACATAAGATATGGCTGTA
TGGCTGGTCATATTACTGCAGAACAACTTACCAAATTCGTATTATACAGTGAATGGTTGATTTATTCTACATGGTGGGTAGGGGACAATTTTTCG
TCATTGATGCAATCTATTGGGGCAAGTGAGAAGGTTTTTCAATTAATGGATCTCGGTTCTAGAGATAAATTCATTGACAAAGGAGCCAAGTTGGA
AGGATTAGCAGGACGCATTGAATTTGTGAATATTAGTTTCTACTATCCTTCAAGAGTTGAGGTGCCAGTACTTCAACATATTAACTTTGTGGTGC
ATCCCGGTGAAGTAGTAGCACTCGTTGGCCTAAGTGGTAGTGGAAAAAGCACTCTGGTGAACCTTCTCCTTCGGCTGTATGAGCCAATAAGTGGG
CAGATATCTATTGATGGCTACCCGATTAGAGATTTGAACATCAAGTGGTTTGAGGGAAAGAATTGGATATGTGGGACAGGAACCTAGACTTTTTC
GCATGGATATCAGCTCAAACATAAGATATGGCTGTA
Unigenes |
Current Unigene builds | |||||
[SGN-E368834] | SGN-U566990 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T182244 [Download][View] | Facility Assigned ID: FA0AAD14AH05RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.966 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |