EST details — SGN-E368973

Search information 
Request: 368973Match: SGN-E368973
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177155Clone name: TUS-25-N1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177155 is on microarray TOM1 spot ID 1-1-8.2.8.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C34201 [cLEG-30-B3] Trace: SGN-T69084 EST: SGN-E255358 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E368973Length: 695 bp (891 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E368973 [] (trimmed) CTCATCAAACATTTGCCCTTAAAATATGCACATAGTCTAGATATTTAAGCACCAGATCGTAGTTTTTTCCAGTTGAAAGAGAAAAAAAGGTGATT
TCAATTTGCAGTTGTTAATCCTAAGGATGAGGATTGAGAAAAATGTGAGTGAACCAAGAGGACGGGAGTATAGCGATTCGAAGAAGAATCGGAGA
AGGCAGAGGATGATTTCCCCGGTTCAAAGACTTTATGAAACTTGCAAAGAAACTTTTGCTAATTGTGGTCCTGGTGTTGTACCATCTGCAGAAAA
GATTGAACGTCTCAAGGAAGTTTTGGATACCATGGCTGGAGCAGACGTTGGCTTGAGACCGAACATGCCATACTTTAAGTCAACAAGATATGACA
GACCTCCTACAATAACGTACCTGCACCTCCATGAGTGTGATAAATTCTCGATTGGTATCTTCTGCTTGCCCCCATCAGCTGTCATTCCACTTCAT
GATCATCCTGGAATGACTGTTTTTAGTAAGCTTCTTTTTGGAGAAATGCACATTAAGTCATATGACTGGGTGGACAACCTCCCTGCTGATCCAAC
TCCAGTTGCTAAACCTTTAGATAATGGACTTGGGGAATCTACTACTGGAATTCGTCTAGCAAAAGTGAAGATAAATTCAGCGTTTAGAGCTCCTT
GCAGGACCTCTATCTTATATCCAGCTGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368973] SGN-U571482 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181926 [Download][View] Facility Assigned ID: FA0AAD13CG01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5