EST details — SGN-E368975
Search information |
Request: 368975 | Match: SGN-E368975 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C177159 | Clone name: TUS-25-N5 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C177159 is on microarray TOM1 spot ID 1-1-4.2.8.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C177159 [TUS-25-N5] | Trace: SGN-T181927 | EST: SGN-E368974 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E368975 | Length: 739 bp (930 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E368975 [] (trimmed)
AACTTGTTCCTCTCCCGCCGGCTATCCAGTTGATATAGCAAGTTTTGATTGATGGGTGTGATTGAATTATGCAACATTTCATCTATTAGCATTGT
TAGAGCAAAACCCAGTTCTTTAAACGAAGGGAATCGGAGGAGGAGAATTGCTTGTATGGCCTCTTCAGTGTCAGTGCAAGAAGAGGAGAGCCATC
AGCAGAAACAAGGTGTAAATGGGGGTTCTTTTATTCGGACCCATCTTCTTAAATTGTCCCCTTACCAACCCATTTTGCCATTTGAGGTCTTGTCC
ACTCGTCTTGGTAGAAAGCCTGAGGACATTGTGAAATTAGACGCTAACGAAAACCCCTATGGACCTCCTCCAGAGGTAAACGAAGCTTTGGGGTC
TATGAAATTTCCATACATTTATCCTGATCCTGAAAGCCGCACGCTGCGTGCAGCTCTTGCTGAAGATTCTGGCCTTGAATCTGAGTATATTCTTG
CAGGGTGCGGTGCAGATGAACTCATTGATTTGATAATGAGATGCATATTGGATCCTGGTGACAAGATTGTTGACTGCCCACCCACTTTCACAATG
TATGAATTTGATGCAGCTGTAAATGGAGCAGGTGTCATCAAGGTGCCTAGGAACCCAGACTTTAGCCTGGACGTTGAACGGATTACCGAAGTGGT
TGAACGTGAGAAACCAAAGTGCATATTTCTGACATCACCTAATAATCCTGATGGGAGTATAATTGATGATGAAA
TAGAGCAAAACCCAGTTCTTTAAACGAAGGGAATCGGAGGAGGAGAATTGCTTGTATGGCCTCTTCAGTGTCAGTGCAAGAAGAGGAGAGCCATC
AGCAGAAACAAGGTGTAAATGGGGGTTCTTTTATTCGGACCCATCTTCTTAAATTGTCCCCTTACCAACCCATTTTGCCATTTGAGGTCTTGTCC
ACTCGTCTTGGTAGAAAGCCTGAGGACATTGTGAAATTAGACGCTAACGAAAACCCCTATGGACCTCCTCCAGAGGTAAACGAAGCTTTGGGGTC
TATGAAATTTCCATACATTTATCCTGATCCTGAAAGCCGCACGCTGCGTGCAGCTCTTGCTGAAGATTCTGGCCTTGAATCTGAGTATATTCTTG
CAGGGTGCGGTGCAGATGAACTCATTGATTTGATAATGAGATGCATATTGGATCCTGGTGACAAGATTGTTGACTGCCCACCCACTTTCACAATG
TATGAATTTGATGCAGCTGTAAATGGAGCAGGTGTCATCAAGGTGCCTAGGAACCCAGACTTTAGCCTGGACGTTGAACGGATTACCGAAGTGGT
TGAACGTGAGAAACCAAAGTGCATATTTCTGACATCACCTAATAATCCTGATGGGAGTATAATTGATGATGAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E368975] | SGN-U574459 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T181928 [Download][View] | Facility Assigned ID: FA0AAD13CG03RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.981 | Expected Error Rate: 0.0070 | Quality Trim Threshold: 14.5 |