EST details — SGN-E369350
Search information |
Request: 369350 | Match: SGN-E369350 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C177094 | Clone name: TUS-25-K12 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C177094 is on microarray TOM1 spot ID 1-1-5.3.8.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C28977 [cLEF-49-M2] | Trace: SGN-T62562 | EST: SGN-E249054 | Direction: 5' | Facility: TIGR |
Clone: SGN-C177094 [TUS-25-K12] | Trace: SGN-T181841 | EST: SGN-E369349 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E369350 | Length: 718 bp (950 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E369350 [] (trimmed)
CGGAAACTGCAAAAAAAAAAAAACACTTTTTCCATCTCCGCTATTGTTTGTGCTTCTACAACAGCTCTGAGATTTCCCAATTATTAGGGCTTTTT
TGCTTTGTTGTTTTTCATTTAGTTCAAAAATGGAGAAAATCAGGAAAGCATCTCATGCTGGTTCTTGGTACACTGATAATCCCCTAGAACTAGAA
GAACAGCTTGATGGCTGGCTGAGAGCTGCTGGCTTAGTCAAGTCTTCTGATGTACGAGGTGTAATTGCACCTCATGCAGGCTATTCATATTCTGG
TCGTGCAGCAGCTTATGCATTTGGGAACATAGACCCGACCAATATTTCTCGGATATTTCTACTCGGTCCATCTCACCACTATTATACTCCAAAAT
GTGCACTTTCAAGAGCCACAGTTTACAAGACTCCTATAGGAGATTTACCCATTGATGAAGAAGTAAATGACGAGCTAAAAGCTACGGGGCACTTT
GAATACATGGATCTTAGAGTTGATGAAGCTGAACATAGCATGGAAATGCACCTTCCATATCTTGCTAAAGTTTTCCAAGGGTATCCAGTGAAAAT
TGTGCCCATTCTGGTTGGGGCTCTTAGTGCTGAAAGTGAAGCCCTTTATGGACGGTTTCTCGCAAAATATGTGGATGACTCGAAGAATTTCTTCT
CAGTGTCTTCGGATTTTTGTCATTGGGGATCAAGGTTCAACTACATACATTAT
TGCTTTGTTGTTTTTCATTTAGTTCAAAAATGGAGAAAATCAGGAAAGCATCTCATGCTGGTTCTTGGTACACTGATAATCCCCTAGAACTAGAA
GAACAGCTTGATGGCTGGCTGAGAGCTGCTGGCTTAGTCAAGTCTTCTGATGTACGAGGTGTAATTGCACCTCATGCAGGCTATTCATATTCTGG
TCGTGCAGCAGCTTATGCATTTGGGAACATAGACCCGACCAATATTTCTCGGATATTTCTACTCGGTCCATCTCACCACTATTATACTCCAAAAT
GTGCACTTTCAAGAGCCACAGTTTACAAGACTCCTATAGGAGATTTACCCATTGATGAAGAAGTAAATGACGAGCTAAAAGCTACGGGGCACTTT
GAATACATGGATCTTAGAGTTGATGAAGCTGAACATAGCATGGAAATGCACCTTCCATATCTTGCTAAAGTTTTCCAAGGGTATCCAGTGAAAAT
TGTGCCCATTCTGGTTGGGGCTCTTAGTGCTGAAAGTGAAGCCCTTTATGGACGGTTTCTCGCAAAATATGTGGATGACTCGAAGAATTTCTTCT
CAGTGTCTTCGGATTTTTGTCATTGGGGATCAAGGTTCAACTACATACATTAT
Unigenes |
Current Unigene builds | |||||
[SGN-E369350] | SGN-U565650 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T181842 [Download][View] | Facility Assigned ID: FA0AAD13BF06RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.964 | Expected Error Rate: 0.0034 | Quality Trim Threshold: 14.5 |