EST details — SGN-E369426

Search information 
Request: 369426Match: SGN-E369426
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176325Clone name: TUS-23-K11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176325 is on microarray TOM1 spot ID 1-1-6.3.10.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26455 [cLEF-40-H2] Trace: SGN-T60187 EST: SGN-E246335 Direction: 5' Facility: TIGR
Clone: SGN-C176325 [TUS-23-K11] Trace: SGN-T180999 EST: SGN-E369425 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369426Length: 631 bp (952 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369426 [] (trimmed) GTGTGTTGGTTTACATAGATTTGATGTTTCTTCTGGTTGCTGTTTCACTGGTTTGCTAAGGAAAAAGTGTGAATCTTCTCACACTACAATACTAT
CTCAAATCCTCTTTGAGACTGTAAGCTTGGTATACCATAGCTCTAATGCAGGGGCAACAGAATACCGTTGGTTCGCTCCAAGAAACTTTAGGTTT
TAATCATGGTTCGACGCCTAGTGAAGGTGGTGTAGATCAACAGATATGTTGGAGTAATTTGCAAAATTCTGCACAGAATCACCTGCCTGATTATA
TGGTTTCTTCAAATGCGACTGATATTCCATTCTTCAATCCTATGAGCCAAGAGAGACAGAATGTAACCAGGGGGAGTTTAGGAGAATCCAGCTCC
TCTATTGCACCGAATTCTGCAAGTTGGAGTGAACAGAAAGCAGATCATGGATGGTCATCCGCAATGACTACATATAATGGACCTTCACTAATCTG
TAATGAACAGCAATGTGGGTCTTCTAACATTATGTCATTGAATGATTTTTTTTCTCAAGGTTCTAGTTCTAGCACCATTCCTCATGAAATCAACG
GGAATCCGGCATTTGAGGGGCGCAGTGACAATATTGACGATGGCTGTCAAGTGATGGAGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369426] SGN-U563918 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181000 [Download][View] Facility Assigned ID: FA0AAD11AF06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0041 Quality Trim Threshold: 14.5