EST details — SGN-E369438

Search information 
Request: 369438Match: SGN-E369438
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176379Clone name: TUS-23-M17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176379 is on microarray TOM1 spot ID 1-1-8.1.10.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26622 [cLEF-41-B15] Trace: SGN-T60291 EST: SGN-E246876 Direction: 5' Facility: TIGR
Clone: SGN-C176379 [TUS-23-M17] Trace: SGN-T181011 EST: SGN-E369437 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369438Length: 731 bp (934 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369438 [] (trimmed) GAAAAGGTTCCCTGTGTGGAGGATTTTGAATTGAAGGCTATGAATCCTTATGGTCGAACAAAGCTATTTCTTGAAGATATTGCACGGGATATCCA
GAAGGCTGATCAAGAATGGAATATCATACTGTTGAGGTATTTCAACCCGGTAGGAGCTCATGAAAGTGGCAAACTCGGGGAAGATCCAAAGGGCA
TTCCGAACAATCTTATGCCTTACATTCAGCAAGTAGCTGTTGGTAGATTGCCGGAGTTGAATGTATATGGCAACGACTACCCTACACCTGATGGT
ACCGCGATACGAGATTATATCCATGTTATGGATTTGGCGGACGGTCATGTTGTTGCACTTCAGAGACTTCTAAGGCAGAATCACATAGGTTGTGT
TGCCTACAATTTGGGTACTGGAAAAGGCAAATCTGTCCTAGAGATGGTTGGTGCCTTTGAAAAGGCGTCTGGAAAGAAAATCCCGCTTAAAATGT
GTCCAAGAAGACCAGGAGATGCCACTGCTGTTTACGCATCTACTGAAAAAGCTGAGAAGGAGCTCGGTTGGAAGGCAAAATATGGGATAAATGAG
ATGTGCAGGGACCAGTGGAAATGGGCAAGCCAAAATCCTTGGGGTTACCAACCAAAGCCTTGATATGTTATAATAATAATAATAATAATACAAGT
AGCACTTGGAGTACAAAACTGTAGTCAACATCCTAGTACTTTACATTTCATGCCAACATTAGATGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369438] SGN-U564745 Tomato 200607 Build 2 49 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181012 [Download][View] Facility Assigned ID: FA0AAD11AG09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0020 Quality Trim Threshold: 14.5