EST details — SGN-E369466

Search information 
Request: 369466Match: SGN-E369466
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176135Clone name: TUS-23-C13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176135 is on microarray TOM1 spot ID 1-1-4.3.11.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C20725 [cLED-30-H11] Trace: SGN-T56357 EST: SGN-E242427 Direction: 5' Facility: TIGR
Clone: SGN-C176135 [TUS-23-C13] Trace: SGN-T181039 EST: SGN-E369465 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E369466Length: 711 bp (948 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369466 [] (trimmed) AAGATAATCCACAAGATATTGATCGCAAGCATATAGCTACAATACTTTTGGACCTATTTAATGCGGGAACTGACACAAGTTCGAATGTAGTGGAA
TGGGCTATGACTGAGCTTCTTAGATCTCCAGATATTATGAAGAAAGTCCAAGCTGAGCTCGTACAAGTCCTCGGAGAAGGTAACCTGATGGAAGA
AACTGACGTTGCCCGACTCCCTTACTTGCAGTGCATTATTAAAGAAACTTACAGGATGCACCCTCCAGCTCCTTTTTTGGTACCTCGAAAAGTAG
AGCAAGATGTTGAGCTGTGTGGCTACACTGTCCCTAAAGGTTCGAAAGTGCTCATTAATGTGTGGGCAATTGGCCGGGACTCGACTCTATGGGAA
GACCCTTTGGTGTTTAATCCTGATAGATTTAAGGATTCAAAATTGGATGTGCGAGGTCAAGATTTTGAGTTAATTCCATTTGGTGCTGGTCGAAG
AATTTGTCCTGGTCTGCCATTGGCAATAAGGATGGTCCCAGTACTGCTAGGCACAATGTTGAATACATTTAAGTGGAAAATTGAGGGTGATATTG
CACCAAATGACATGGACATGCAGGAGAAATTTGGCCTCACCTTGGCCAAACTTCGTCCTCTCCGAGCTGTCCCCCTTCCCCTTTAATATCCAAAA
AAAATGAATAAATAAATAATAATTTAATATAAGCACAAATTTATGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369466] SGN-U577054 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181040 [Download][View] Facility Assigned ID: FA0AAD11AB07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0025 Quality Trim Threshold: 12.5