EST details — SGN-E369522
Search information |
Request: 369522 | Match: SGN-E369522 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C176415 | Clone name: TUS-23-O5 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C176415 is on microarray TOM1 spot ID 1-1-4.3.11.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C26695 [cLEF-41-E3] | Trace: SGN-T60215 | EST: SGN-E246800 | Direction: 5' | Facility: TIGR |
Clone: SGN-C176415 [TUS-23-O5] | Trace: SGN-T181097 | EST: SGN-E369523 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E369522 | Length: 490 bp (915 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E369522 [] (trimmed)
AGGGGTTTATTATAAAAGGTTCAAACATACTTATAGCAGTAATTTTTTTTCCTACCCAGGAAAAGGCATACCCCTGCTGTTGCACTAAAATCAAA
CAAGCCACATAATCCAGTTCCAATAACAATTTAACAACATAAATAGATGACCCTTATGCTGAAGCAGCAGCTTTTTCCAGCAACTGTTTCACCTT
GGTGATGTAGTCGTTCATGGCTTCATCGGTGGATTTTCCTTCAACAGCCTTCCATGCATCCCACTTTGCTCTGTCTCTCATGTTGAACATGCCAG
GACGGCTTGTGTTGACATCGCCAACGGGGGCTTGCTTGTAAAGTCCGTAAAGAATAAGCTTGTTCTCATTGGTGGTACTCTCAGGCAATGTCTTA
GCTTTCTCAGCATGTGCTTCAAATTCCTCCTTCAAAGCCATGATCTGATCTGGTTAGCTTGATAAAAACGCGAGAAAACTGGAGGNTTTTCTTTT
TTTTTTTTTTTTTTT
CAAGCCACATAATCCAGTTCCAATAACAATTTAACAACATAAATAGATGACCCTTATGCTGAAGCAGCAGCTTTTTCCAGCAACTGTTTCACCTT
GGTGATGTAGTCGTTCATGGCTTCATCGGTGGATTTTCCTTCAACAGCCTTCCATGCATCCCACTTTGCTCTGTCTCTCATGTTGAACATGCCAG
GACGGCTTGTGTTGACATCGCCAACGGGGGCTTGCTTGTAAAGTCCGTAAAGAATAAGCTTGTTCTCATTGGTGGTACTCTCAGGCAATGTCTTA
GCTTTCTCAGCATGTGCTTCAAATTCCTCCTTCAAAGCCATGATCTGATCTGGTTAGCTTGATAAAAACGCGAGAAAACTGGAGGNTTTTCTTTT
TTTTTTTTTTTTTTT
Unigenes |
Current Unigene builds | |||||
[SGN-E369522] | SGN-U579768 | Tomato 200607 | Build 2 | 106 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T181096 [Download][View] | Facility Assigned ID: FA0AAD11AH03FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.959 | Expected Error Rate: 0.0174 | Quality Trim Threshold: 14.5 |