EST details — SGN-E369536

Search information 
Request: 369536Match: SGN-E369536
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176874Clone name: TUS-25-B8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176874 is on microarray TOM1 spot ID 1-1-1.2.8.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28067 [cLEF-46-H18] Trace: SGN-T61592 EST: SGN-E247181 Direction: 5' Facility: TIGR
Clone: SGN-C176874 [TUS-25-B8] Trace: SGN-T182024 EST: SGN-E369535 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369536Length: 687 bp (924 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369536 [] (trimmed) CTGGAGTCGGTTTAAGCATATATTTGACATTGACATGCTTGAACAAACTACGAACATAAAGCTGTACTACCTTGCTGGAAACCATGATATAGGGT
ATGCAGCTTTTCACTCGCGTATGCCGGAGGTTATCAAACGCTACGAGAAAGCATTTGGTGAAAGGAACTATCAGTTTACAGCTGGGAAAGTAGAT
TTCATCACCATCGATGCGCAAACCTTAGATGGGCATCCCCAGAACAATATAACCCCTGCCACATGGGAATTTGTCAAGAATGTCTCTAACCATCT
GTCTTCGAATCCAAGGGTTCTATTGACTCATATTCCATTGTATCGACCAGATCAAACTGCCTGCGGTTCATACCGCTCATCGTCAATTATTAATC
AGAGAATCAACCGTGCTGCTCAGGATAAGGAAATATTATATCAAAACTATATTACTGAAAAAGGAACGAATGACCTGCTTGACTCGATCAAACCT
GCACTAATTCTCTCCGGGCATGACCATGATCAGTGTACAGTGATCCACAAATCCAAATATGGTTCCGTAGAAGAGCATACTCTAGGTACTATAAG
CTGGCAGCAGGGAAATTTGTTTCCATCTTACATGCTATTATCTGCAAGTAGCCTTATCTTACCGAATGGATCAATGTCAGCGGATGCAATTTCCA
CCAAAGTGTGCTTTCTCCCTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369536] SGN-U581096 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182025 [Download][View] Facility Assigned ID: FA0AAD13DA04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0029 Quality Trim Threshold: 14.5