EST details — SGN-E369542

Search information 
Request: 369542Match: SGN-E369542
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176920Clone name: TUS-25-D6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176920 is on microarray TOM1 spot ID 1-1-3.4.8.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28173 [cLEF-46-M23] Trace: SGN-T61614 EST: SGN-E247203 Direction: 5' Facility: TIGR
Clone: SGN-C176920 [TUS-25-D6] Trace: SGN-T182032 EST: SGN-E369543 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E369542Length: 696 bp (938 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E369542 [] (trimmed) GAAATTAACTCACTTTGAACTAGGTGTAAATATTCAAAATACAAGAGTTTTTATCAAGAGCTTGTTTTTGCTGCATGCCACAAGTGAAGTATCAA
AGTTCTATACAAATTACAAACCAACTAGTAAAGACACCATAACTAGATACTTCACAGTATAAGGTTGGAGATTCATTCCTTTTAGTAATTCTACA
CATTTTCTTTATCACAAAGGTAAATAGTTGAAATCGAATACACGCACGTGTGAAAGACTTCCATCGATAACACTAAACTATAAACATCACGAGTC
GTATATATGTACTGAAAGTTAATCCTCAGAATCTGAATATGGTGGACAAGATCCATCATCTACATTGGCTAGTGGATTATACTGGGGAGAATCTG
GATCAATGCATCCCGGTACTAGATCAAGATTGCAACGATCACCTCCATCCACATTCAAGTTACCAACCATAGCACATCTTGTGATCAAGATACTC
GAGTCCGGGAAGATTGCCCTGTCACAGGCACCCTCCTGGCTCAACTCCTGTGTAAGACCCTCAGTGAAGAATTCAGTTGGTTTATTTCTCCAAGC
CTTGGGGACTTGAAATTGTAGTCTATAGGGACCATCCCATTCGATTCCATTTGTGAATGAGAAGATCAAACTAAGAGCATGCTTGGGAATACATA
ACTGAATCGTATAAATAGGAGGGTCGGCTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369542] SGN-U581329 Tomato 200607 Build 2 62 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182031 [Download][View] Facility Assigned ID: FA0AAD13DB03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5