EST details — SGN-E369661

Search information 
Request: 369661Match: SGN-E369661
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177082Clone name: TUS-25-J24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177082 is on microarray TOM1 spot ID 1-1-1.2.8.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28955 [cLEF-49-L19] Trace: SGN-T62434 EST: SGN-E248926 Direction: 5' Facility: TIGR
Clone: SGN-C177082 [TUS-25-J24] Trace: SGN-T182149 EST: SGN-E369660 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369661Length: 665 bp (897 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369661 [] (trimmed) CACGAGAGAATCTCGATCTGCCGCAAGCCGAAAAAAACCCTAGCAGCAGAAAGGGAAGAAGCAGAGCACAACCATGGCGACGCAAGATGTAAGGA
CTCTTTCGACTAAAGAAGCTGACATTCAGATGATGTTGGCTGCTGAAGTTCACCTCGGTACTAAGAATTGTGACTTCCAAATGGAGCGATACGCT
TTCAAGCGCCGTAACGATGGTATCTACATCATCAACCTTGGAAAGACATGGGAAAAGCTTCAAATGGCTGCCAGGGTGATTGTTGCTATTGAGAA
TCCTCAGGACATCATTGTTCAATCTGCCAGGCCTTATGGACAGAGAGCTGTCTTGAAATTTGCTCAATATACTGGTGCACATGCTATTGCTGGAC
GTCACACCCCTGGAACTTTTACCAATCAGCTTCAGACCTCATACAGTGAGCCACGACTCTTGATTCTGACTGATCCAAGAACTGACCATCAGCCA
ATCAAGGAAGCTGCACTTGGAAACATCCCAACTATTGCTTTCTGTGACACTGATTCTCCAATGCGTTATGTTGACATTGGTATCCCTGCCAATAA
CAAAGGAAAGCACAGCATTGGTGTTCTTTTCTGGATCTTAGCAAGGATGGTACTCCAGATGCGTGGGGCCATTAATCAAGGACCTAAATGGGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369661] SGN-U579857 Tomato 200607 Build 2 163 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182150 [Download][View] Facility Assigned ID: FA0AAD13DE12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5