EST details — SGN-E369688
Search information |
Request: 369688 | Match: SGN-E369688 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C176868 | Clone name: TUS-25-B2 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C176868 is on microarray TOM1 spot ID 1-1-7.2.8.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C28055 [cLEF-46-G6] | Trace: SGN-T61545 | EST: SGN-E247134 | Direction: 5' | Facility: TIGR |
Clone: SGN-C176868 [TUS-25-B2] | Trace: SGN-T182101 | EST: SGN-E369612 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E369688 | Length: 526 bp (917 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E369688 [] (trimmed)
AAAAGGAAAACAAAATACTAAATCCCAAACAAAACAAGATATACATCCCCAACAAAATCAAGCTACTTAAAAGTCGTTATAATTCTATTCAAAAT
TCTGTTTCTTCTCTTTTATTCCCCGTCTATTTTCCTTCATTGCCATCACCAAATGTAAAGACTAAACTCATTGATTGCTTGAAGAAGCACACAAT
AGCTTCCAACCCCTGGTCGACGTAAAAATTAACTCTTTAACTTGGATTTACAACTGGACTGCGAATGTTGAGCACCAGCTTGTCCAGCCATCTCA
TTGCCACACTAATTAGATGGAGTACTTAATTCAGCAGATGATGATCTACTAAGATGTGCTTCGACATTTCCATGTGTTACAGTCTTATCATCAAA
TGCAACACGTTGGAGATTTTCAACAAGTAAATCAGAAGCAGACTTTGGTAGAGATTGAGGACTTGACACTGTTGAATTCTGAACTGATGGTGGCA
TGAGCCAATTAAACCAATCATTTTTCCGCCTTAACTTTTCACCCTGCACTT
TCTGTTTCTTCTCTTTTATTCCCCGTCTATTTTCCTTCATTGCCATCACCAAATGTAAAGACTAAACTCATTGATTGCTTGAAGAAGCACACAAT
AGCTTCCAACCCCTGGTCGACGTAAAAATTAACTCTTTAACTTGGATTTACAACTGGACTGCGAATGTTGAGCACCAGCTTGTCCAGCCATCTCA
TTGCCACACTAATTAGATGGAGTACTTAATTCAGCAGATGATGATCTACTAAGATGTGCTTCGACATTTCCATGTGTTACAGTCTTATCATCAAA
TGCAACACGTTGGAGATTTTCAACAAGTAAATCAGAAGCAGACTTTGGTAGAGATTGAGGACTTGACACTGTTGAATTCTGAACTGATGGTGGCA
TGAGCCAATTAAACCAATCATTTTTCCGCCTTAACTTTTCACCCTGCACTT
Unigenes |
Current Unigene builds | |||||
[SGN-E369688] | SGN-U573252 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T182177 [Download][View] | Facility Assigned ID: FA0AAD13DA01FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.952 | Expected Error Rate: 0.0026 | Quality Trim Threshold: 14.5 |