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EST details — SGN-E369890

Search information 
Request: 369890Match: SGN-E369890
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177463Clone name: TUS-26-J21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177463 is on microarray TOM1 spot ID 1-1-4.2.6.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C37490 [cLEG-42-D3] Trace: SGN-T72458 EST: SGN-E259697 Direction: 5' Facility: TIGR
Clone: SGN-C177463 [TUS-26-J21] Trace: SGN-T182505 EST: SGN-E369891 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369890Length: 747 bp (917 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E369890 [] (trimmed) AACAACAAGAACTTTACATTATTAACAATACATAGGGGGGATCTTTTAACAAGACGAAGCTCGATAATACAACAAACATAACTAGTAAATCTCCA
GAAAGAACAACACAAGCAGAGTAATTTCTTTGATGTAAGCTAAAATACTTATCACCAACACGAGGCGTAGCTAGCTAGGCTCTCGATGTTAGTAA
CTACTTGCATGAATATCCGGGGATCTGTATGAAGCGTTGCTCCTGTTATGCAAACTTATATCTGTACTAAACCTTCATCATCGTTCTCTTGACAC
AAACAAAGGCGATATATAACCCATACGAGCAAAGGGAGACCGGAGAAGAGAGACTATTCTTCACACTCGTACTCCTTCATCATCTTCCTATCCCG
ATAATAGTTGCAACATACAACTATTATCCAACGGAAGTTTCCATTTCCATAACTAAGCAACGCCACTATCCCATTATACGTCTTACTAACTAAAT
TCAAACTCATAACCTCCCGAGCTCATTACGTATCACCAACATTAGGCGAAGCTAGACTCTCAATGTAAGTAATCGCTTGTACTTGAAGACAATAA
CCCAATGAATGAATGTCCAAGGATTCATGTGAAGCATTCCTCGCGTTGTACAAACTTATATTAGTACCAAGCCTCACTAAAACCTCACCACCATT
CTCCGACACAGACAAAGGCGAGACATAACCTAAACGGCCAGAAGGGGCCGTGATATTAGAGACCAACTTAGTCCACGACGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369890] SGN-U563593 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182504 [Download][View] Facility Assigned ID: FA0AAD14CE11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0022 Quality Trim Threshold: 14.5