EST details — SGN-E370186

Search information 
Request: 370186Match: SGN-E370186
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178246Clone name: TUS-28-K12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178246 is on microarray TOM1 spot ID 1-1-5.3.4.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65055 [cLEM-8-D13] Trace: SGN-T85395 EST: SGN-E271844 Direction: 5' Facility: TIGR
Clone: SGN-C178246 [TUS-28-K12] Trace: SGN-T183377 EST: SGN-E370187 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370186Length: 653 bp (901 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370186 [] (trimmed) GAGACTGTCGTCATTAACATTACAGTTATAGTAATAGGTAATTTTTGAATACAAATCAGAGCCACTATATCTTTCAAGTGCAAGTAGAAAATGCA
GACTGATCACAAAAGAAAGAGAGCAGGCAGCATACACATGCAATGTTTTTTAATTAGTTGGCGACATTGTGCGAAGAAGATTTGTCATTCATGAC
ATGTGGCTGTGATTTCCTATACCGAATGTTTGTGGGATAATCTTCCTGTTGGTGTTAGTCACCAGTACCTAAAATTTACTTTAAAAATGATGATA
AATTTCATGCCTCACTGATTCAAACTGTTTTGCTTAAGAAATTCAAGGTCTTTCATTTGCATCTGAACTGCTTCTTTTGATAATTGCTTGGGCTC
ATATTTGATTTCTTCAGTTCCATCTGCCATTCTCTTTGCCTTCTCTTTGACAATGATTTCTACCTTTTGCCGCCCGACTGTAGGAAAGACAGCAT
TAAGCATGGTACTTAGCAGTTTTTCATCTTCTTCATCAATCAGATCCCTTCCATAGCAACACACATGTATAGCTTCAAGAGCTTTCTCAGCACGA
AATTCCATGGGGATTGTAGGTGCTGGAGCTCCCAACTTTGATCGCTTCTCCCTTGCTTCATTCATCATTGCGATGAAGTTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370186] SGN-U579029 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183376 [Download][View] Facility Assigned ID: FA0AAD16BF06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5