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EST details — SGN-E370239

Search information 
Request: 370239Match: SGN-E370239
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178156Clone name: TUS-28-G18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178156 is on microarray TOM1 spot ID 1-1-7.3.4.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64640 [cLEM-6-L6] Trace: SGN-T84521 EST: SGN-E270765 Direction: 5' Facility: TIGR
Clone: SGN-C178156 [TUS-28-G18] Trace: SGN-T183428 EST: SGN-E370238 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370239Length: 667 bp (891 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370239 [] (trimmed) GCAACAGCGGTTTTCCATTACTCTTCTCTTCTGAGTTCTGTGGGCGCTTGATTTCCAACAAAAAGGTTTAGAAAATCAGAAGTTACGAGATGGTC
AGAGCTTATTCACAAGAGCACACATATAAGCATCCATGGGAAAGAGTAACTTCTGCATCCTGGCGCAAGTTTGCTGATCCTGAGAACAAGCGCAT
TCTATCGCATATCCTCGAAGTTGACACATTGAACCACAAGCTTGATTCCATCTCAGGGAGGCTTTATACGACTCGTGCCATAACTATTCATGCAC
CAGGACCATGGTTCCTCCGCAAAATCATTCGTCAAGACATCTGCCACTGTGTAGAATCAACTGTTGTTGATGCCCAATCTCGGTCCATGCAGCTC
TCCACTCGAAACATTAGTCTGGAGAAGTACATAGAAGTGGAAGAGAAAATCAGATATGACCCTCATCCAGATAATCCAAAGTTATGGACCGTCTG
CAAGCAGGAAACGAGTATCAGGATTAAGCCCTTATCAGCACTGGCTTCAATGGCAGAGAAAATTGAACAGAAGTGTGTGGACAAGTTTCAGGCCA
ACAGCGCANAGGGAAGAGAAGTAATGGAACGAATGTGCAAGTACCTTGAAGCTGAATCCAGAGGCATTTCAGCATGATTTAGCATTTGAACTATA
CA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370239] SGN-U576023 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183429 [Download][View] Facility Assigned ID: FA0AAD16BD09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0044 Quality Trim Threshold: 14.5