EST details — SGN-E370498

Search information 
Request: 370498Match: SGN-E370498
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178539Clone name: TUS-29-G17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178539 is on microarray TOM1 spot ID 1-1-8.3.3.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72178 [cLER-1-G19] Trace: SGN-T92051 EST: SGN-E280497 Direction: 5' Facility: TIGR
Clone: SGN-C72178 [cLER-1-G19] Trace: SGN-T92052 EST: SGN-E280498 Direction: 3' Facility: TIGR
Clone: SGN-C178539 [TUS-29-G17] Trace: SGN-T183838 EST: SGN-E370497 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370498Length: 468 bp (903 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370498 [] (trimmed) CTCTAAAAAAGGCCACAAAATCCCCAAAACCCAATCAAATTTTCTTGAGTACAACAACAATGGCTGCCACTACAGCTGCTGCCATTTTCACCCTT
CCAAAGCTCTGCAAATCCTCCATTAGCCCAAAATCCATATCCCTTTTTTCCCCAAAATCCACTCTTTCTTCTTCTTTCTCCATTTCATCTGTTCC
ATTCAAGGTACATCACTCAAAGCGCACCGTACGACCCCTTTCATACACCACTCCAAGAATCTCCGCCGTCATCTCCGTCGGAGACAAATTACCCA
ATTCCACACTTTCCTACTTCGATTCATCCGATGAACTCCAGACCCTTTCCGTCTCTGACCTCACATCTGGGAAAAAGGTTGTTCTTTTCGCCGTC
CCAGGTGCATTTACACCAACATGTTCACAGAAACATCTTCCTGGTTTCGTGGAGAAGTCGAAGGAGCTAAAATCGAAAGGGGTTGATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370498] SGN-U579170 Tomato 200607 Build 2 48 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183839 [Download][View] Facility Assigned ID: FA0AAD17AD09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0004 Quality Trim Threshold: 14.5