EST details — SGN-E370560

Search information 
Request: 370560Match: SGN-E370560
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177728Clone name: TUS-27-E22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177728 is on microarray TOM1 spot ID 1-1-3.1.6.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C62010 [cLEM-1-C9] Trace: SGN-T83780 EST: SGN-E270407 Direction: 5' Facility: TIGR
Clone: SGN-C177728 [TUS-27-E22] Trace: SGN-T182936 EST: SGN-E370561 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E370560Length: 629 bp (858 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370560 [] (trimmed) AGGGTGTTTATCAGCACAATTTTTTATACCTCATGACCGCATCAAGGCAGAATTGTAATGCTGCTAGTATTCTTCTGTTTCTACACCGTGTTGTT
GACGTCTTTAAGCATTACTTTGAAGAGCTAGAAGAGGAATCCCTACGAGATAATTTTGTTGTAGTGTATGAATTACTTGATGAAATGATGGACTT
TGGTTATCCTCAATATACCGAAGCAAAAATTCTCAGTGAGTTTATAAAAACTGATGCATATAGAATGGAGGTTACACAAAGGCCTCCAATGGCAG
TTACAAATGCTGTGTCCTGGCGCAGTGAAGGGATCCAATACAAGAAGAATGAAGTATTTTTGGATGTTGTGGAGAGTGTTAATATACTTGTTAAT
AGCAATGGGCAAATAGTGAGGTCAGATGTTGTCGGTGCATTGAAGATGCGGACATACTTGAGTGGTATGCCGGAGTGTAAGCTTGGTCTGAATGA
TAGAGTATTGCTGGAAGCACAAGGACGTAATGCTAAGGGGAAGGCTATTGATCTAGATGATATCAAGTTTCATCAGTGTGTGCGTTTGGCCCGAT
TTGAGAATGATCGTACTATATCATTCATACCTCCTGATGGAGCTTTCGAAGTTATGACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370560] SGN-U582355 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182935 [Download][View] Facility Assigned ID: FA0AAD15BC11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0002 Quality Trim Threshold: 20.5