EST details — SGN-E370740

Search information 
Request: 370740Match: SGN-E370740
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178312Clone name: TUS-28-N6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178312 is on microarray TOM1 spot ID 1-1-3.2.4.4 [Order] [Tomato Microarray Database]
See unigene SGN-U580349 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C65169 [cLEM-8-I19] Trace: SGN-T85492 EST: SGN-E271941 Direction: 5' Facility: TIGR
Clone: SGN-C178312 [TUS-28-N6] Trace: SGN-T183671 EST: SGN-E370739 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370740Length: 634 bp (886 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370740 [] (trimmed) GCTAGAAGAGCCCTTCACCGTTGCAGTGCAAACCCACCGGAACCCTAGGATACTTCGTCGCCGGCAACCATGGGTATCTCTCGGGATTCGATGCA
CAAGAGACGTGCCACTGGAGGCAAGAAGAAGGCATGGAGGAAGAAGCGAAAGTATGAGATGGGAAGACAGTCTGCAAATACAAAGTTGGTGCCTA
ATGCTAAGACTGTTAGGAGGATCAGGGTCCGAGGAGGCAATGTGAAGTGGCGTGCTTTGAGGTTGGACACTGGAAATTACTCTTGGGGTAGTGAA
GCTGTTACTAGGAAGACCCGTTTATTGGATGTTGTCTACAATGCCTCAAACAACGAGTTGGTTAGAACACAAACTCTAGTGAAGAGTGCTATTGT
GCAAGTTGATGCAGCTCCATTTAAACAGTGGTATCTCCAGCACTATGGTGTTGAAATTGGTCGCAAGAAGAAGAGTGCTGCCAAGAAGGAAGGAG
AGGAGGTTGCTGAGGCTGCTGCAGAGGAGAAGAAAAGTAACCATGTCCAAAGAAAGCTGGAAAAACGTCAACAGGATCGTAAGATTGACGCACAT
ATTGAAGAGCAATTTGCTAGTGGTCGTCTTTTGGCGGCAATCTCATCACGACCTGGCCAATGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370740] SGN-U580349 Tomato 200607 Build 2 63 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183672 [Download][View] Facility Assigned ID: FA0AAD16DG03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0020 Quality Trim Threshold: 14.5