EST details — SGN-E370753
Search information |
Request: 370753 | Match: SGN-E370753 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C178366 | Clone name: TUS-28-P12 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178366 is on microarray TOM1 spot ID 1-1-5.4.4.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C65257 [cLEM-8-M22] | Trace: SGN-T85549 | EST: SGN-E271998 | Direction: 5' | Facility: TIGR |
Clone: SGN-C178366 [TUS-28-P12] | Trace: SGN-T183684 | EST: SGN-E370752 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E370753 | Length: 647 bp (899 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E370753 [] (trimmed)
GACGGATTGTGCTGGCTGCTGCTGCAAAGCACTTGACACCTGTGGTTTTGGAGCTAGGTGGTAAATCTCCAGTTGTGGTGGATTCAAACATCGAT
TACAAGATTGCAGTAAGGCGTATTATTGCTGGCAAGTGGGGCTGCAACAATGGACAAGCGTGCATCTCTCCTGATTATATAATTACTACCAAAGA
AAGTGTGCCAAAATTGCTAGATGCTATGAAACAGGAATTGGAGAAATTCTATGGAAAGGATCCACTAAAATCAGGAGATCTATCTCGCATTGTGA
ATGCTAACCACTTTCAACGACTATCAAAGTTACTGGATGATAATAAGGTTGTCGATAAGGTAGTTCATGGAGGTCAGAGAGATGAAAATAATTTA
AAGATCTCTCCTACAATTCTTCTGGATGTCCCAGAAGATTCTTTAATCATGAAGGAGGAAATATTTGGTCCTCTACTTCCTATTATCACGGTCAA
TAAAGTGGAGGATTCTATACAATTCATTAAAGCCAGAGAAAAGCCACTTGCAGCATATCTGTTCACAAGCAACAAGATACTGGAGGAGGAGTTTG
TCATGAATATATCAGCAGGGGGTCTGCTTATCAATGACACCACTTTACAAGTTGCGCTTTCTACTCTTTCATTTGGA
TACAAGATTGCAGTAAGGCGTATTATTGCTGGCAAGTGGGGCTGCAACAATGGACAAGCGTGCATCTCTCCTGATTATATAATTACTACCAAAGA
AAGTGTGCCAAAATTGCTAGATGCTATGAAACAGGAATTGGAGAAATTCTATGGAAAGGATCCACTAAAATCAGGAGATCTATCTCGCATTGTGA
ATGCTAACCACTTTCAACGACTATCAAAGTTACTGGATGATAATAAGGTTGTCGATAAGGTAGTTCATGGAGGTCAGAGAGATGAAAATAATTTA
AAGATCTCTCCTACAATTCTTCTGGATGTCCCAGAAGATTCTTTAATCATGAAGGAGGAAATATTTGGTCCTCTACTTCCTATTATCACGGTCAA
TAAAGTGGAGGATTCTATACAATTCATTAAAGCCAGAGAAAAGCCACTTGCAGCATATCTGTTCACAAGCAACAAGATACTGGAGGAGGAGTTTG
TCATGAATATATCAGCAGGGGGTCTGCTTATCAATGACACCACTTTACAAGTTGCGCTTTCTACTCTTTCATTTGGA
Unigenes |
Current Unigene builds | |||||
[SGN-E370753] | SGN-U579227 | Tomato 200607 | Build 2 | 59 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T183685 [Download][View] | Facility Assigned ID: FA0AAD16DH06RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.970 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 14.5 |