EST details — SGN-E370854
Search information |
Request: 370854 | Match: SGN-E370854 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C177843 | Clone name: TUS-27-J17 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C177843 is on microarray TOM1 spot ID 1-1-8.2.6.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C64114 [cLEM-5-C24] | Trace: SGN-T85021 | EST: SGN-E271216 | Direction: 5' | Facility: TIGR |
Clone: SGN-C177843 [TUS-27-J17] | Trace: SGN-T1471 | EST: SGN-E378277 | Direction: 5' | Facility: Giov. Lab |
Sequence |
Sequence Id: SGN-E370854 | Length: 658 bp (875 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E370854 [] (trimmed)
GCTGGATCATTTAGTTCAGAGGACCGATATTGACACATCAAGAATAGTAGTCTTTGGAAGGTCACTTGGAGGAGCTGTTGGCACTGTTCTTACCA
AAAACAATCCTGACAAGGTAGCTGGGCTCATTTTGGAGAATACTTTCACCTCTATCCTGGATATGGCAGGAGTTCTCTTGCCATTCTTGAAGTGG
GTCATTGGTGGCAGTGGCTCAAAGGGTTTCAAGCTTCTTAACTTTGTTGTTCGATCTCCATGGAATACCATTGATGTCATTGGTGAGATCAGGCA
ACCAATCCTCTTCCTATCTGGATTACAAGATGAGATGGTTCCACCATTCCACATGCAGATGCTGTATGCAAAGGCAGCGGCACGTAACAGGCAAT
GCTTATTTGTGGAATTTCCTAGTGGGATGCACATGGATACCTGGTTGGCAGGTGGTGATCATTATTGGAGGACAATTCAGAAATATTTGGAAGAA
ACTGTCCCAGAGAAGAAGGATGATGAATCAAAGAAGGATTCCGAACTGTCCTCTAAGCAAAATGTATCTTCAGATTTCGCTGCAAGCTGAAATGT
TGAGTTTCAGGCAGTTCAAATGTAACTTTGGATTCGAGGATTCAAATACATTTCTTTTGATGTTGCAGTGATGAAGAGCAGTTTGTGA
AAAACAATCCTGACAAGGTAGCTGGGCTCATTTTGGAGAATACTTTCACCTCTATCCTGGATATGGCAGGAGTTCTCTTGCCATTCTTGAAGTGG
GTCATTGGTGGCAGTGGCTCAAAGGGTTTCAAGCTTCTTAACTTTGTTGTTCGATCTCCATGGAATACCATTGATGTCATTGGTGAGATCAGGCA
ACCAATCCTCTTCCTATCTGGATTACAAGATGAGATGGTTCCACCATTCCACATGCAGATGCTGTATGCAAAGGCAGCGGCACGTAACAGGCAAT
GCTTATTTGTGGAATTTCCTAGTGGGATGCACATGGATACCTGGTTGGCAGGTGGTGATCATTATTGGAGGACAATTCAGAAATATTTGGAAGAA
ACTGTCCCAGAGAAGAAGGATGATGAATCAAAGAAGGATTCCGAACTGTCCTCTAAGCAAAATGTATCTTCAGATTTCGCTGCAAGCTGAAATGT
TGAGTTTCAGGCAGTTCAAATGTAACTTTGGATTCGAGGATTCAAATACATTTCTTTTGATGTTGCAGTGATGAAGAGCAGTTTGTGA
Unigenes |
Current Unigene builds | |||||
[SGN-E370854] | SGN-U572689 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T183091 [Download][View] | Facility Assigned ID: FA0AAD15CE09RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.966 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 14.5 |