EST details — SGN-E370888
Search information |
Request: 370888 | Match: SGN-E370888 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C177649 | Clone name: TUS-27-B15 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C177649 is on microarray TOM1 spot ID 1-1-2.2.6.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C46841 [cLEI-13-N3] | Trace: SGN-T82656 | EST: SGN-E268595 | Direction: 5' | Facility: TIGR |
Clone: SGN-C177649 [TUS-27-B15] | Trace: SGN-T183126 | EST: SGN-E370889 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E370888 | Length: 676 bp (911 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E370888 [] (trimmed)
AAATCTCAAATTAAAGCAACAAAAATCCTGAGCCACCATGGAAAACAAACCAAGGCACCTCAACAAAAGCAAATGATAACAGACTCAAAATCATG
CTCGCCACCGCCTATCAAGTACCCAGTTCTGAGAATGGATACTTGAGATACAAGTCAGAGAACTACAACCTAATACACAACTCAAAGACCAAACT
AAAGCAGAATTAAATAAAACAGAGTCTAGATAGCACACTCGATGTAAATAAATAGCATTCGAAACACCAGCATCACACTGCACAGTTCACTTCCC
CTTCTTCTGGGCAGCCTTGGTCACCTTGGCACCAGTTGGGTCCTTCTTGTCAACATTCTTGACAACACCGACAGCAACAGTCTGCCTCATGTCCC
TCACAGCAAAACGACCCAATGGAGGGTATTCAGCAAAGGTCTCAACAACCATGGGCTTGGTGGGAATCATCTTAACCATACCAGCATCACCGTTC
TTCAAGAACTTAGGCTCCTTCTCAAGTTCCTTACCTGAACGCCTGTCAATCTTGGTCAAGATCTCAGCAAACTTGACAGCAATGTGTGAAGTGTG
ACAGTCGAGCACAGGGGCATATCCGTTTCCAATCTGGCCAGGATGGTTCATGATGATGACCTGNGCAGTGAAGCTGGCTGCCCCCTTGGCTGGGT
CATCCTTGGAG
CTCGCCACCGCCTATCAAGTACCCAGTTCTGAGAATGGATACTTGAGATACAAGTCAGAGAACTACAACCTAATACACAACTCAAAGACCAAACT
AAAGCAGAATTAAATAAAACAGAGTCTAGATAGCACACTCGATGTAAATAAATAGCATTCGAAACACCAGCATCACACTGCACAGTTCACTTCCC
CTTCTTCTGGGCAGCCTTGGTCACCTTGGCACCAGTTGGGTCCTTCTTGTCAACATTCTTGACAACACCGACAGCAACAGTCTGCCTCATGTCCC
TCACAGCAAAACGACCCAATGGAGGGTATTCAGCAAAGGTCTCAACAACCATGGGCTTGGTGGGAATCATCTTAACCATACCAGCATCACCGTTC
TTCAAGAACTTAGGCTCCTTCTCAAGTTCCTTACCTGAACGCCTGTCAATCTTGGTCAAGATCTCAGCAAACTTGACAGCAATGTGTGAAGTGTG
ACAGTCGAGCACAGGGGCATATCCGTTTCCAATCTGGCCAGGATGGTTCATGATGATGACCTGNGCAGTGAAGCTGGCTGCCCCCTTGGCTGGGT
CATCCTTGGAG
Unigenes |
Current Unigene builds | |||||
[SGN-E370888] | SGN-U580418 | Tomato 200607 | Build 2 | 320 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T183125 [Download][View] | Facility Assigned ID: FA0AAD15CA08FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.969 | Expected Error Rate: 0.0070 | Quality Trim Threshold: 14.5 |