EST details — SGN-E370985

Search information 
Request: 370985Match: SGN-E370985
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178517Clone name: TUS-29-F19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178517 is on microarray TOM1 spot ID 1-1-6.2.3.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72153 [cLER-1-F14] Trace: SGN-T92189 EST: SGN-E280635 Direction: 5' Facility: TIGR
Clone: SGN-C178517 [TUS-29-F19] Trace: SGN-T184055 EST: SGN-E370986 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E370985Length: 709 bp (879 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370985 [] (trimmed) CATTTATAACTCCAAGTTTGGGAGCACTCATTAATCTTATGAATACCCCTCAAACTAGATATTGCTTGCTAAAAGGTATAAATTAACAGATGAAA
ACTCTCATCTAAAACTACTGGGGTACTGAACATAATATGTTTATAAAGACGAGAGACACTGCGATAAATCACCCGCAAATCTTACTGTCATATCC
GTCATCCGAAACCAACTAGCAAGTAACTAGCTCCCATGTTATGATGTTGTATTCCATCAAATATTACTAAGGCCAAGAAAGCAGCTGCATTTGCT
GGAGCAACATAACGCTGATTGGGCAACTACACCTCTCAAGAAAAACCCATTTACAAAGCCTAAGCAACTGTCTTCACAAAATTCACTTGCGCAAG
TGTTCAGGAATAAGGCGCTTTCGCAGTTCAGCAGGCACGCCAGAGAGCTCTTGAGGTGAAAAGTTGAATAGGGGAGGCAGAGGTCGCCCATTTGG
CAAGCAAGCATTTGGTTCCCTTAAAGAATCAAAGAAAGGGTGTGCACATGCTTCCAAAGCAGTGCAGCGTAGAGTTGGAGAATATTGGAGAAGCC
TCGACACCAAATCAACTGCTTCAGGGGGCATTCTTTTATGAAATATCTTGTGCCATGGGTGAGCTTTGATCTGGGGAAACTTGAACTCTGTGTAA
TTTGGATTCATGCACCTAATCTCCTCTCTTGTTGGTGTCCCCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370985] SGN-U574092 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184054 [Download][View] Facility Assigned ID: FA0AAD17CC10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0076 Quality Trim Threshold: 14.5