EST details — SGN-E371020
Search information |
Request: 371020 | Match: SGN-E371020 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C178707 | Clone name: TUS-29-N17 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178707 is on microarray TOM1 spot ID 1-1-8.2.3.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C70493 [cLER-15-A22] | Trace: SGN-T95320 | EST: SGN-E282800 | Direction: 5' | Facility: TIGR |
Clone: SGN-C178707 [TUS-29-N17] | Trace: SGN-T184088 | EST: SGN-E371019 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E371020 | Length: 678 bp (900 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E371020 [] (trimmed)
ATTGGAAATTTTAAACAACTCCAAGATTTATCAATCAGGTTTGGCATGGTAGGATCTTGATTATGGATGATATGATATTTCAAGGCGGCTCTCAG
ACAATCGCCCTGCACTGTCTTACATGTGAAAATGTATTTTGATTTCTTACACCCAGAGTCCATTGAAGACATGGGGTATTCTCTAAGTAAGTTAG
AAGTAGACACCGGACTCTTTGATGGTTCAAGTTCCAATCATGGGGTTGCTAGCAGTGTTCATCATGAAAGACCAACAAATTATTTGGACCATGAA
ATTTCTCAACTTACTAAGCTTAGATCAGGACCCCATGAAAATCTCAGTAGAATCCTACCAGGGAAAAAGGAAGTTCCTGTATCCGCATTCAAGAT
GTTAGCTGCTCGAGAAGCCAATATTTCCGGTAGAGGAAGGTTTTCGAAGGCAGATTGTTGTCATGTTCTAAGTAAATATTTGCCAGTTAGTGGTC
CTTGGATTGTGGACCAGATGGAAACCAGAGCTTATGTATCACAATTTTCAGCAGATGGTTCCCTTTTTGTTGCTGCCTTTCAGGGAAGTCATATT
AGAATATACAATGTGGAAAGAGGGTGGAAAGTTCACAAGAATATTCATGCAAAAAGTTTGAGATGGACAGTTACTGATACATCTCTTTTTTTCGG
ATCAACGTCATTT
ACAATCGCCCTGCACTGTCTTACATGTGAAAATGTATTTTGATTTCTTACACCCAGAGTCCATTGAAGACATGGGGTATTCTCTAAGTAAGTTAG
AAGTAGACACCGGACTCTTTGATGGTTCAAGTTCCAATCATGGGGTTGCTAGCAGTGTTCATCATGAAAGACCAACAAATTATTTGGACCATGAA
ATTTCTCAACTTACTAAGCTTAGATCAGGACCCCATGAAAATCTCAGTAGAATCCTACCAGGGAAAAAGGAAGTTCCTGTATCCGCATTCAAGAT
GTTAGCTGCTCGAGAAGCCAATATTTCCGGTAGAGGAAGGTTTTCGAAGGCAGATTGTTGTCATGTTCTAAGTAAATATTTGCCAGTTAGTGGTC
CTTGGATTGTGGACCAGATGGAAACCAGAGCTTATGTATCACAATTTTCAGCAGATGGTTCCCTTTTTGTTGCTGCCTTTCAGGGAAGTCATATT
AGAATATACAATGTGGAAAGAGGGTGGAAAGTTCACAAGAATATTCATGCAAAAAGTTTGAGATGGACAGTTACTGATACATCTCTTTTTTTCGG
ATCAACGTCATTT
Unigenes |
Current Unigene builds | |||||
[SGN-E371020] | SGN-U572324 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T184089 [Download][View] | Facility Assigned ID: FA0AAD17CG09RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.964 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 14.5 |