EST details — SGN-E371020

Search information 
Request: 371020Match: SGN-E371020
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178707Clone name: TUS-29-N17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178707 is on microarray TOM1 spot ID 1-1-8.2.3.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70493 [cLER-15-A22] Trace: SGN-T95320 EST: SGN-E282800 Direction: 5' Facility: TIGR
Clone: SGN-C178707 [TUS-29-N17] Trace: SGN-T184088 EST: SGN-E371019 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371020Length: 678 bp (900 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371020 [] (trimmed) ATTGGAAATTTTAAACAACTCCAAGATTTATCAATCAGGTTTGGCATGGTAGGATCTTGATTATGGATGATATGATATTTCAAGGCGGCTCTCAG
ACAATCGCCCTGCACTGTCTTACATGTGAAAATGTATTTTGATTTCTTACACCCAGAGTCCATTGAAGACATGGGGTATTCTCTAAGTAAGTTAG
AAGTAGACACCGGACTCTTTGATGGTTCAAGTTCCAATCATGGGGTTGCTAGCAGTGTTCATCATGAAAGACCAACAAATTATTTGGACCATGAA
ATTTCTCAACTTACTAAGCTTAGATCAGGACCCCATGAAAATCTCAGTAGAATCCTACCAGGGAAAAAGGAAGTTCCTGTATCCGCATTCAAGAT
GTTAGCTGCTCGAGAAGCCAATATTTCCGGTAGAGGAAGGTTTTCGAAGGCAGATTGTTGTCATGTTCTAAGTAAATATTTGCCAGTTAGTGGTC
CTTGGATTGTGGACCAGATGGAAACCAGAGCTTATGTATCACAATTTTCAGCAGATGGTTCCCTTTTTGTTGCTGCCTTTCAGGGAAGTCATATT
AGAATATACAATGTGGAAAGAGGGTGGAAAGTTCACAAGAATATTCATGCAAAAAGTTTGAGATGGACAGTTACTGATACATCTCTTTTTTTCGG
ATCAACGTCATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371020] SGN-U572324 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184089 [Download][View] Facility Assigned ID: FA0AAD17CG09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5