EST details — SGN-E371057

Search information 
Request: 371057Match: SGN-E371057
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178551Clone name: TUS-29-H5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178551 is on microarray TOM1 spot ID 1-1-4.4.4.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72194 [cLER-1-H11] Trace: SGN-T91948 EST: SGN-E280394 Direction: 5' Facility: TIGR
Clone: SGN-C178551 [TUS-29-H5] Trace: SGN-T184125 EST: SGN-E371056 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371057Length: 550 bp (909 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371057 [] (trimmed) TTTCAGCTGACCCTGAAACATTCGCTAAGAACCGTGAGTTGGAGGTTATTCATTGCAGATGGGCCATGCTTGGTGCTCTTGGATGTGTTTTCCCC
GAGCTTTTGGCACGTAACGGTGTTAAGTTTGGTGAAGCTGTATGGTTCAAAGCTGGATCTCAAATTTTCAGCGAGGGCGGACTTGACTACTTGGG
AAACCCTAGTTTGGTTCATGCACAAAGCATTTTGGCTATTTGGGCTTGCCAAGTTGTGTTGATGGGAGCCGTTGAGGGTTACCGTATTGCTGGTG
GGCCTCTTGGTGAGGTTGTTGATCCACTTTACCCTGGTGGTAGCTTTGACCCATTGGGCCTTGCTGAAGACCCAGAGGCTTTTGCTGAGCTCAAG
GTGAAGGAGATCAAGAATGGTAGACTTGCTATGTTCTCCATGTTTGGATTCTTTGTTCAAGCTATTGTCACCGGAAAGGGTCCGTTGGAGAACCT
TGCCGACCACATTGCTGACCCAGTTAACAACATCGCCTGGGCTTTTGCCACACACTTTGTTCCCGGAAAGTGAGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371057] SGN-U581203 Tomato 200607 Build 2 306 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184126 [Download][View] Facility Assigned ID: FA0AAD17CD03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5