EST details — SGN-E371132

Search information 
Request: 371132Match: SGN-E371132
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178175Clone name: TUS-28-H13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178175 is on microarray TOM1 spot ID 1-1-4.4.4.6 [Order] [Tomato Microarray Database]
See unigene SGN-U577771 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C64673 [cLEM-6-N16] Trace: SGN-T84699 EST: SGN-E270943 Direction: 5' Facility: TIGR
Clone: SGN-C178175 [TUS-28-H13] Trace: SGN-T183491 EST: SGN-E371131 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371132Length: 636 bp (886 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371132 [] (trimmed) GCTTCCGATCATAGTTTTCATCGCCTCTCGTTAACTTCTAGATCTTCAACAAAAATGGCCAAAGATCCAGTTCGCGTTCTCGTTACTGGTGCTGC
AGGACAAATTGGATATGCCTTGGTGCCTATGATTGCCAGGGGAGTGATGTTGGGCGCAGATCAGCCTGTAATTCTCCACATGTTGGATATTCCAC
CTGCTGCTGAGGCACTGAATGGAGTGAAGATGGAATTAGTAGATGCTGCCTTCCCTCTTCTTAAGGGTGTCGTTGCCACAACTGATGCTGTTGAG
GCATGCACCGGTGTCAACGTTGCGGTCATGGTTGGAGGTTTCCCCAGGAAAGAAGGCATGGAAAGGAAAGATGTGATGTCAAAGAATGTGTCTAT
TTACAAGTCCCAGGCATCTGCACTTGAGAAGCATGCAGCTCCCAACTGCAAGGTGTTGGTTGTTGCTAACCCTGCTAATACAAATGCATTGATCT
TGAAAGAATTTGCACCATCCATTCCTGAGAAGAATATTACCTGTCTCACAAGGTTGGACCATAACAGGGCCCTCGGCCAAATCTCAGAGAGACTG
AGTGTCCAAGTTAGTGATGTTAAAAATGTCATTATTTGGGGAAACCACTCATCATCACAGTATCCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371132] SGN-U577771 Tomato 200607 Build 2 330 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183492 [Download][View] Facility Assigned ID: FA0AAD16CD07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 0.0056 Quality Trim Threshold: 14.5