EST details — SGN-E371444

Search information 
Request: 371444Match: SGN-E371444
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178610Clone name: TUS-29-J16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178610 is on microarray TOM1 spot ID 1-1-1.2.4.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72269 [cLER-1-K4] Trace: SGN-T92116 EST: SGN-E280562 Direction: 5' Facility: TIGR
Clone: SGN-C178610 [TUS-29-J16] Trace: SGN-T184210 EST: SGN-E371443 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371444Length: 578 bp (932 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371444 [] (trimmed) TGATGATGAAGAGTTGCTTGAGCTTGTTGAGCTGGAGGTAAGAGAGTTATTGTCAAGTTATGAGTTTCCTGGTGATGATATTCCTATTCATTGTG
GGTCTGCCCTTTTGGCTTTAGAGGCTTTAATGGCTAATCCTACTATTAAAAGGGGTGATGATCAATGGGTTGATAAGATTTATAAATTGATGGAC
TCTGTTGATGAATATATTCCTATTCCACAAAGACAAACTGAATTACCTTTCTTGATGGCTATTGAAGATGTGTTTTCTATTACTGGTAGAGGTAC
AGTGGCTACAGGGAGAGTGGAAAGAGGGACTGTTAAGACAGGGGAAATTGTTGATATAGTTGGATTGAAGGACACTAGGAACACTACAGTAACAG
GAGTTGAGATGTTTCAGAAGATATTGGATGAAGCAATGGCAGGAGATAATGTGGGGTTGTTGCTGCCTGGTATTTCTTAGATCCATACTCCAAGA
GTACTGGCTTGGGGTGAGCCTGAATCGATCCCTGCTCTCCCCACACCATTCCCTTTTGAGTATGTGTCTTTTGAATACCTCGCAACAACAACCCC
CCATTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371444] SGN-U577523 Tomato 200607 Build 2 62 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184211 [Download][View] Facility Assigned ID: FA0AAD17DE08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.931 Expected Error Rate: 0.0004 Quality Trim Threshold: 14.5