EST details — SGN-E371495

Search information 
Request: 371495Match: SGN-E371495
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178500Clone name: TUS-29-F2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178500 is on microarray TOM1 spot ID 1-1-7.2.4.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72136 [cLER-1-E17] Trace: SGN-T92040 EST: SGN-E280486 Direction: 5' Facility: TIGR
Clone: SGN-C72136 [cLER-1-E17] Trace: SGN-T92041 EST: SGN-E280487 Direction: 3' Facility: TIGR
Clone: SGN-C178500 [TUS-29-F2] Trace: SGN-T184263 EST: SGN-E371496 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371495Length: 726 bp (860 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371495 [] (trimmed) GGTTGGAAAGAGCAAAAAAGAAGTCCAATTAAGCAACTCATCTCAGCACCATATGTTTTGTAGAGGGGGGAAGAACTAAGTACATACAAACTTAA
ATAATGGTTTTCTTTAGTTTTCCCATTCTTAAGCAATACTGAAAGAAGTGGCAGCATTCTCCACAAACTTTTTAGCACCCTTAAACCATCTCTTG
TCACCAGCTTGTGCCTTGCAAATGTAAAGTTTGCCATCATTCACTGTGGCTGTGATCAACTGGTGCTTTCCACCTTCATCTCCATCTGCAGTTCT
TGTCAATACTGACAAGTAGTAGTACTCTTTTCCTCCCACTGTTGCGCTTGATGCCTCCAACAGGTTAGCAGTTGCCACTGCACCAGATTCAAATC
CTCCCTCTGAATCAGTTTTACCAAAGTAAGCTTGCTTTCCTAGCAGATAGTCCACTTTAGAGAGGAACTCTTCAGGGGAGCCGTAGTCGGTGATG
GACTTCTTGTCAGTTGGAGTAACTGCAACAATAAGATTACTTGTGGAATCAAAGTTGTCTTCATATCTGAGAACCTGACCAGGGTACTCAACTTC
TTTGCTGGGGTTCCATTTGGCTGGGACTTGGAGCTTGAATCCATCTCCATTGTATGGCAAGAAATCAGTGTTTTCCTTTGGCTTACCCAAAACAT
TTGCAGCTTCTCCATAGGCAGCATCTGCAGGGGAAACCTTGGGACCAATGGCAGCAGTACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371495] SGN-U581281 Tomato 200607 Build 2 298 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184262 [Download][View] Facility Assigned ID: FA0AAD17DC01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0078 Quality Trim Threshold: 14.5