EST details — SGN-E371496

Search information 
Request: 371496Match: SGN-E371496
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178500Clone name: TUS-29-F2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178500 is on microarray TOM1 spot ID 1-1-7.2.4.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72136 [cLER-1-E17] Trace: SGN-T92040 EST: SGN-E280486 Direction: 5' Facility: TIGR
Clone: SGN-C72136 [cLER-1-E17] Trace: SGN-T92041 EST: SGN-E280487 Direction: 3' Facility: TIGR
Clone: SGN-C178500 [TUS-29-F2] Trace: SGN-T184262 EST: SGN-E371495 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371496Length: 673 bp (912 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371496 [] (trimmed) AGAGAGTAATTGAGCAATGGCTGCTTCCACACAATGTTTCTTGCACCAATATCATGCACTAAGATCTAGCCCTGCTAGAACATCCTCTGTTTCAT
CTCCTAAGCCTAACCAATTGATTTGCCGTGCACAAAAGCAAGATGATGCCAGCAACGCCGCCGTCTCGAGACGATTGGCTCTTACTCTCCTCATT
GGTACTGCTGCCATTGGTTCCAAGGTTTCCCCTGCAGATGCTGCCTATGGAGAAGCTGCAAATGTTTTTGGTAAGCCAAAGGAAAACACTGATTT
CTTGCCATACAATGGAGATGGATTCAAGCTCCAAGTCCCAGCCAAATGGAACCCCAGCAAAGAAGTTGAGTACCCTGGTCAGGTTCTCAGATATG
AAGACAACTTTGATTCCACAAGTAATCTTATTGTTGCAGTTACTCCAACTGACAAGAAGTCCATCACCGACTACGGCTCCCCTGAAGAGTTCCTC
TCTAAAGTGGACTATCTGCTAGGAAAGCAAGCTTACTTTGGTAAAACTGATTCAGAGGGAGGATTTGAATCTGGTGCAGTGGCAACTGCTAACCT
GTTGGAGGCATCAAGCGCAACAGTGGGAGGAAAAGAGTACTACTACTTGTCAGTATTGACAAGAACTGCAGATGGAGATGAAGGTGGAAAGCACC
AGTTGATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371496] SGN-U581281 Tomato 200607 Build 2 298 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184263 [Download][View] Facility Assigned ID: FA0AAD17DC01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0010 Quality Trim Threshold: 14.5