EST details — SGN-E371588

Search information 
Request: 371588Match: SGN-E371588
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178542Clone name: TUS-29-G20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178542 is on microarray TOM1 spot ID 1-1-5.3.3.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72185 [cLER-1-G3] Trace: SGN-T91841 EST: SGN-E280287 Direction: 5' Facility: TIGR
Clone: SGN-C72185 [cLER-1-G3] Trace: SGN-T91842 EST: SGN-E280288 Direction: 3' Facility: TIGR
Clone: SGN-C178542 [TUS-29-G20] Trace: SGN-T183918 EST: SGN-E371589 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E371588Length: 687 bp (881 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371588 [] (trimmed) AAAAAATCCATAATCAGAATTCAAAAATACGAAGTACATTATAGCAATGATATAGAATAGAAATGACACAAGGAATAAGCTGTAATGTATGTTCT
CCAAAACCTACGGTAATATGTAATTAGAGTAAAATGGACGACAAAAATAGTGGACTAAGCCCGAACAATAGCCAGAGTTCAAACAGTCAGTGACC
ATAGTTCGATCACTTACTCTCTCTAGCACCAGGCGTGGTCTTAGCTAACGTTACTTAGGTCTTACTGGTGATCAAGAAGCCTTCACTTTCTCTCC
TCAGCTACCGTGATGGGGCCCCTGCTGATGTTTTTCACCATTACGCCTTGGCGCTGAACCACCAAGAGGAAATAGTGATACCATCACACTTTCTA
ATATAGAACACATTGATCTTAATTTTAATCACCCAATCCAGCCCTTTTCTTCAAGTGTTTCTTGAAATCCATGATGCCACCCTCCCATCGTGTCA
CAGCCTGATTTTCACATACCCATATCTCATGGGCCACCTGGTTTATGAGCCTAAAGTCGTGACTCACTAGAACCATCCCACCATCCCATGCGTTC
AAGGCCTCTGCAAGTGAGTCAATGGTTTCAATATCAAGATGGTTGGTTGGCTCATCCAACAGCAGCATGTGGGGTTGCCTAAAAGCCAACCATGC
AAAAATCACTCGACTACGTTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371588] SGN-U579050 Tomato 200607 Build 2 129 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183917 [Download][View] Facility Assigned ID: FA0AAD17BD10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0034 Quality Trim Threshold: 14.5